Protein Alignment CG5776 and CDC48C

DIOPT Version :10

• Sequence 1: NP_609585.1
• Gene: CG5776 / 34680
• FlyBaseID: FBgn0032450
• Length: 799
• Species: Drosophila melanogaster
• Sequence 2: NP_001326134.1
• Gene: CDC48C / 821105
• AraportID: AT3G01610
• Length: 830
• Species: Arabidopsis thaliana
• Alignment Length: 722
• Identity: 211/722 - (29%)
• Similarity: 349/722 - (48%)
• Gaps: 118/722 - (16%)

  Fly   152 SALHPSRLTAAASISLKHVNTTETSLKSVQLQDAIALLKRDMVNRVFYKDSLIHMNF--FNKSLT 214
            |.|....:..:.|.|....:::|.|......:||:            |.:.|....|  .|.||.
plant   111 SHLRKRNMERSVSSSPSSSSSSEDSGDVSTSEDAV------------YGEKLSPPRFDLINDSLR 163

  Fly   215 FRLERWQSTVEEALAGLSLDSKPLQFIQVTNVTKLHLITDDANQQEEEQKISHRI---------- 269
            ....:..|:.::.:.  |...|.::...|:|..:..|.|..|   .:|.|:|..:
plant   164 DNYAKLNSSSKKPIG--SPAEKNVEVETVSNKGRSKLATMGA---RKEAKVSLSLSGATGNGDLE 223

  Fly   270 -------TKCQIGGLDRQLQLVEESMEYAL----GFRTLPAGLRVSRGLLLYGATGCGKSMVLEA 323
                   |....||:.:.|..:|.::.:.:    .|:.:  |::...|:|.:|..||||:.:..|
plant   224 VEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKI--GVKPPSGILFHGPPGCGKTKLANA 286

  Fly   324 MCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQE 388
            :.      ::..|...:|::.||.|...|.:|:.:..:|.:||.  ..|:::.|:::..:..|:|
plant   287 IA------NEAGVPFYKISATEVISGVSGASEENIRELFSKAYR--TAPSIVFIDEIDAIGSKRE 343

  Fly   389 NS--DLVKRVSLAFLSLLDQLSSPSQLKGSK---------TFVLATSSQIDTLHPSIRRAGRLDN 442
            |.  ::.||:....|:.:|   .|.. ||.|         ..|:..:::.|.|.|::||:||.:.
plant   344 NQQREMEKRIVTQLLTCMD---GPGN-KGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFET 404

  Fly   443 EVELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADLANLVYAAMLQA------- 500
            |:.|.||...||.||:..:.:.:..: ...:.:.:|.:|.|:|||||.::.|.|..:|
plant   405 EIALTAPDEDARAEILSVVAQKLRLE-GPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDS 468

  Fly   501 -----------------QPNP--------LQMPHLQAALTRIKPSAMREVLIECPNVQWSDIGGQ 540
                             .|.|        ::|...:.|:..::.|..||.....|:|:|.|:||.
plant   469 RKSEQSGDGEDDKSWLRMPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGL 533

  Fly   541 SELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPEL 605
            ..|||...:.|..|:...|.::..|:....|.|::|||||.||:||||.|.|:..||:.|||.||
plant   534 DHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAEL 598

  Fly   606 FSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDG 670
            .:.:|||||.|:|.:|::||..||.::||||:||:...|.:     .|:.|.||:|.|.|.||||
plant   599 LNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGK-----EGAWVVERLLNQFLVELDG 658

  Fly   671 VEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKL 735
            .|. :||.::.||||||::|.|.|||||...:|||.||..:.|..|||...|..||...||::.:
plant   659 GER-RNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGI 722

  Fly   736 VQLT-EGYSGAEIQAVCHEAALRALEQ----SFEAED---------VKWTDFEHALKAVPPRTSP 786
            .:.. ||:|||::..:..:|..:|:|:    |..:||         :|...||.||..|.|..:.
plant   723 AKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSEDDVTDITQCTIKTRHFEQALSLVSPSVNK 787

  Fly   787 ELLKLYE 793
            :..:.|:
plant   788 QQRRHYD 794

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5776	NP_609585.1	CDC48	183..797	CDD:273521	205/691 (30%)
CDC48C	NP_001326134.1	CDC48	<223..808	CDD:273521	186/593 (31%)