Protein Alignment CG5776 and CDC48

DIOPT Version :10

• Sequence 1: NP_609585.1
• Gene: CG5776 / 34680
• FlyBaseID: FBgn0032450
• Length: 799
• Species: Drosophila melanogaster
• Sequence 2: NP_187595.1
• Gene: CDC48 / 820142
• AraportID: AT3G09840
• Length: 809
• Species: Arabidopsis thaliana
• Alignment Length: 816
• Identity: 248/816 - (30%)
• Similarity: 419/816 - (51%)
• Gaps: 129/816 - (15%)

  Fly    47 DSEAEYVRSGAIYTRSLQQRNFEV-ESLKDLPTKYANMLVFVSEGAMQLAQLHIGQHVVLE---- 106
            ||:::...|.||..|........| |::.|     .|.:|.:....|:..||..|..::::
plant     9 DSKSKKDFSTAILERKKSPNRLVVDEAIND-----DNSVVSLHPATMEKLQLFRGDTILIKGKKR 68

  Fly   107 --------APSTAEQPLVRIVWPTSEQFLTTVFVSEGD-FKLH-CTQLR-GKLLKISALHPSRLT 160
                    |..|.|:|.:|:    ::...:.:.|..|| ..:| |..:: ||.:
plant    69 KDTVCIALADETCEEPKIRM----NKVVRSNLRVRLGDVISVHQCPDVKYGKRV----------- 118

  Fly   161 AAASISLKHVNTTETSLKSVQLQDAIALLKRDMVN--RVFYKDSLIHMNFFNKSLTFRLERWQST 223
                    |:...:.:::.|......|.||...:.  |...|..|..:....:|:.|::
plant   119 --------HILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKV------ 169

  Fly   224 VEEALAGLSLDSKPLQFIQVTNVTKLHLITDDANQQEEEQKISHRITKCQIGGLDRQLQLVEESM 288
                     :::.|.::..|...|::....:...:::||:  ...:....:||:.:|:..:.|.:
plant   170 ---------IETDPAEYCVVAPDTEIFCEGEPVKREDEER--LDDVGYDDVGGVRKQMAQIRELV 223

  Fly   289 EYALG----FRTLPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSK 349
            |..|.    |:::  |::..:|:||||..|.||:::..   |||.|..   .....||..|:.||
plant   224 ELPLRHPQLFKSI--GVKPPKGILLYGPPGSGKTLIAR---AVANETG---AFFFCINGPEIMSK 280

  Fly   350 FLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQE--NSDLVKRVSLAFLSLLDQLSSPSQ 412
            ..||:|..|...||.|..:  .|:::.|:::.::.||:|  |.::.:|:....|:|:|.|.|.:.
plant   281 LAGESESNLRKAFEEAEKN--APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAH 343

  Fly   413 LKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHV 477
            :     .|:..:::.:::.|::||.||.|.|:::|.|....|||::|...|::: ...|.::|.:
plant   344 V-----IVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMK-LAEDVDLERI 402

  Fly   478 ASITHGYVGADLANLVYAAMLQAQPNPLQM--------------------PHLQAALTRIKPSAM 522
            :..||||||||||.|...|.||.....:.:                    .|...||....|||:
plant   403 SKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSAL 467

  Fly   523 REVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAK 587
            ||.::|.|||.|:||||...::..:|:.:::|:.|.:||::.|:.|.:|:|.:|||||.||::||
plant   468 RETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 532

  Fly   588 ALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSS 652
            |:|.|.:.||:|:|||||.:||.||||..|||:|.||||.||.::||||:|:|..:|..|.|...
plant   533 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDG 597

  Fly   653 GSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREIL 717
            |.:. :|||.|||||:||:.|.:.|.|:.||||||:||.|||||||:|:::|:.||..::|..|.
plant   598 GGAA-DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIF 661

  Fly   718 KIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAE---------------- 766
            |..||..||:.|||:..|.:.|:|:|||:|..:|..|...|:.::.|.:
plant   662 KAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEE 726

  Fly   767 -------DVKWTDFEHALKAVPPRTSPELLKLYEDY 795
                   ::|...||.::|......|...::.|:.:
plant   727 DGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAF 762

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5776	NP_609585.1	CDC48	183..797	CDD:273521	219/664 (33%)
CDC48	NP_187595.1	CDC48	29..768	CDD:273521	242/796 (30%)