Protein Alignment CG5776 and CDC48B

DIOPT Version :10

• Sequence 1: NP_609585.1
• Gene: CG5776 / 34680
• FlyBaseID: FBgn0032450
• Length: 799
• Species: Drosophila melanogaster
• Sequence 2: NP_178463.1
• Gene: CDC48B / 814895
• AraportID: AT2G03670
• Length: 603
• Species: Arabidopsis thaliana
• Alignment Length: 560
• Identity: 207/560 - (36%)
• Similarity: 324/560 - (57%)
• Gaps: 37/560 - (6%)

  Fly   260 EEEQKISHRI-------TKCQIGGLDRQLQLVEE----SMEYALGFRTLPAGLRVSRGLLLYGAT 313
            |.|..:...|       .:.:|||.:|.||.:.|    ...|.|..|||  ||:..|||||||..
plant     3 ETESSVCDNIAGNEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTL--GLKWPRGLLLYGPP 65

  Fly   314 GCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNH--YPHPTLLL 376
            |.||:.::.|:.    :....|  ||.::...|:....||:|:.|...|..|.:|  ...|:::.
plant    66 GTGKTSLVRAVV----QECDAH--LIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIF 124

  Fly   377 IEDVHNLCPKQE---NSDLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAG 438
            |:::..|||:::   ..|:  |::....:|:|. :.||. ...:..|:|:::::|.:.|::||||
plant   125 IDEIDVLCPRRDARREQDV--RIASQLFTLMDS-NKPSS-SAPRVVVVASTNRVDAIDPALRRAG 185

  Fly   439 RLDNEVELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADLANLVYAAMLQAQPN 503
            |.|..||:..|:.:.||:|::...|.|....| .:::.:|...:|||||||..|...|.:.|...
plant   186 RFDALVEVSTPNEEDRLKILQLYTKKVNLDPS-VDLQAIAISCNGYVGADLEALCREATISASKR 249

  Fly   504 P-----LQMPHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQR 563
            .     |.....:.|.:.:.||..|.:.:|.|.|.|.|:||..:|:..:|||:|||:.|:..|.:
plant   250 SSDSLILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVK 314

  Fly   564 LGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVA 628
            :||.|.||||:.||||||||.:|||.|..::.:|.|:...|||||:|||.|..:|..|::||..:
plant   315 MGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLAS 379

  Fly   629 PAIVFFDEIDAIGGERSEGDGSSSGSS-VKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKA 692
            |:|:||||.|.:..:|  ||.|||.|| |.||:|:.||||:||:|..:.:.::||||||..||.|
plant   380 PSIIFFDEADVVACKR--GDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAA 442

  Fly   693 LLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALR 757
            |:||||.|.:|||..|..|||.|||::..|.|.:.:|||:.|:.:.|:.::|||::.:|.|:...
plant   443 LMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTV 507

  Fly   758 ALEQSFEAEDVKWTDFEHALKAVPPRTSPELLKLYEDYLK 797
            :|.::..|..|....|:.|..::.|..:.|.::.|..:.|
plant   508 SLRENIAATAVFNRHFQTAKSSLKPALTIEEVETYSSFRK 547

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5776	NP_609585.1	CDC48	183..797	CDD:273521	206/558 (37%)
CDC48B	NP_178463.1	CDC48	<23..551	CDD:273521	204/540 (38%)