DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5776 and zgc:136908

DIOPT Version :10

Sequence 1:NP_609585.1 Gene:CG5776 / 34680 FlyBaseID:FBgn0032450 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_001035017.1 Gene:zgc:136908 / 563679 ZFINID:ZDB-GENE-060312-22 Length:805 Species:Danio rerio


Alignment Length:809 Identity:257/809 - (31%)
Similarity:419/809 - (51%) Gaps:113/809 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 PDSEAEYVRSGAIYTRSLQQRNFEVESLKDLPTKYANMLVFVSEGAMQLAQLHIGQHVVLEAPST 110
            |.|.|...::....|..|:|:......:.|..|...|.:|.:|:..|:..||..|..|||.....
Zfish     2 PASGASDPKTEDFSTAILKQKIRPNRLIVDEATNEDNSIVCLSQVKMEELQLFRGDTVVLRGRKR 66

  Fly   111 AEQPLVRIVWPTSEQFLTTVFVSEGDFKLHCTQ-----LRGKLLKISALHP-------SRLTAAA 163
            .:...:.:...|.           |:.::...:     ||.:|..:.::||       .|:    
Zfish    67 RQTVCIVLTDDTC-----------GNERVRMNRVTRNNLRVRLGDVISIHPCPDVKYGKRI---- 116

  Fly   164 SISLKHVNTTETSLKSVQLQDAIALLKRDMVNRVFYKDSLIH-MNFFNKSLTFRLERWQSTVEEA 227
                 ||         :.:.|.|..|..::.: ||.|...:. ....:|...|.:......||..
Zfish   117 -----HV---------LPIDDTIEGLTGNLFD-VFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFK 166

  Fly   228 LAGLSLDSKPLQFIQVTNVTKLHLITDDANQQEEEQKISHRITKCQIGGLDRQLQLVEESMEYAL 292
            :    :::.|.....|...|.:|...:...:::||:.::. |....|||..:||..::|.:|..|
Zfish   167 V----VETDPTPHCIVAPDTIIHCEGEPIKREDEEESLND-IGYDDIGGCRKQLAQIKEMVELPL 226

  Fly   293 GFRTL--PAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSKFLGETE 355
            ....|  ..|::..||:||||..|.||::|..   |||.|..   .....||..|:.||..||:|
Zfish   227 RHPALFKAIGVKPPRGILLYGPPGTGKTLVAR---AVANETG---AFFFLINGPEIMSKLAGESE 285

  Fly   356 QKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQE--NSDLVKRVSLAFLSLLDQLSSPSQLKGSKT 418
            ..|...||.|..:  .|.::.|:::..:.||:|  :.::.:|:....|:|:|.|...:.:     
Zfish   286 SNLRKAFEEAEKN--APAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHV----- 343

  Fly   419 FVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSVEHQLS-DEEVEHVASITH 482
            .|:|.:::.:::..::||.||.|.|:::|.|.|..||||::...|::  :|| |.::|.:::.||
Zfish   344 VVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLEILQIHTKNM--KLSEDVDLEQISAETH 406

  Fly   483 GYVGADLANLVYAAMLQAQPNPLQMPHLQA--------------------ALTRIKPSAMREVLI 527
            |:||||||.|...|.|||....:.:..|:.                    ||::..|||:||.::
Zfish   407 GHVGADLAALCSEAALQAIRKKMTLIDLEDDSIDADLLNSLAVTMDDFKWALSQSNPSALRETVV 471

  Fly   528 ECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALATE 592
            |.|:|.|.||||..|::..:|:.:::|:.:.|||.:.|:.|.||:|.:|||||.||::|||:|.|
Zfish   472 EVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANE 536

  Fly   593 SKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVK 657
            .:.||:|||||||.:||.||||..||:||.||||.||.|:||||:|:|...|..|.|.:.|::  
Zfish   537 CQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGGAA-- 599

  Fly   658 ERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLR 722
            :||:.|:|||:||:...:||.|:.||||||:||.|:|||||:|:::|:.||...:|..||:..||
Zfish   600 DRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSRTAILRANLR 664

  Fly   723 AMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAE--------------------- 766
            ..|::.|||:..|.::|||:|||::..:|..|...|:.::.|||                     
Zfish   665 KSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAIEAEIRAERQRQARKETAMDDDYDP 729

  Fly   767 --DVKWTDFEHALKAVPPRTSPELLKLYE 793
              :::...||.|::......|...::.||
Zfish   730 VPEIRKDHFEEAMRFARRSVSDNDIRKYE 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5776NP_609585.1 CDC48 183..797 CDD:273521 229/660 (35%)
zgc:136908NP_001035017.1 CDC48 27..766 CDD:273521 251/784 (32%)

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