Protein Alignment CG5776 and Atad2b

DIOPT Version :10

• Sequence 1: NP_609585.1
• Gene: CG5776 / 34680
• FlyBaseID: FBgn0032450
• Length: 799
• Species: Drosophila melanogaster
• Sequence 2: XP_038969041.1
• Gene: Atad2b / 500625
• RGDID: 1566199
• Length: 1555
• Species: Rattus norvegicus
• Alignment Length: 515
• Identity: 143/515 - (27%)
• Similarity: 238/515 - (46%)
• Gaps: 67/515 - (13%)

  Fly   278 DRQLQLVEESMEYALGFRTLPAGLR-VSRGLLLYGATGCGKSMVLEAM--CAVAEERSQGHVQLI 339
            |..|..:...||.....|:...... |::.||...........||:.|  ..:...|..|.|:.:
  Rat   150 DGDLSCINGDMEVRKSCRSRKNRFESVNQSLLFDQLVNSTAEAVLQEMDNINIRRNRRSGEVERL 214

  Fly   340 RI------NSGEVYSKFLGETEQKLGAIFERAY---NHYPHPTLLLIEDVHNLCPKQENSDLVKR 395
            |:      .:.::||:    .:::..::...:|   ||:...|....|:     .::|:.|:...
  Rat   215 RMWTDTEFENMDMYSR----VKRRRKSLRRNSYGIQNHHEVSTEGEEEE-----SQEEDGDIEVE 270

  Fly   396 VSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRC 460
            .:..     ::...|..|:..||.....:..|...|...|.....|..   .:|:.::.:...:.
  Rat   271 EAEG-----EENDRPYNLRQRKTVDRYQAPPIVPAHQKKRENTLFDIH---RSPARRSHIRRKKH 327

  Fly   461 LIKSVEHQLSDEE-VEHVAS----------ITHGYVGADLANLVYAAMLQAQPNPLQMPHLQAAL 514
            .|.|.:...|||| .|...|          :...:...|||:.:....::          :.|:|
  Rat   328 AIHSSDTTSSDEERFERRKSKSMARARNRCLPMNFRAEDLASGILRERVK----------VGASL 382

  Fly   515 TRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPG 579
            ..:.|..:.:      :|::..|||.|....|:::.:.:|||:.:.|::..|:||||.|.:||||
  Rat   383 ADVDPMNIDK------SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPG 441

  Fly   580 CSKTMIAKALATE-----SKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDA 639
            ..||::|:|||.|     .|:.|...||.:..|.|||||||.:|.:|.:|..:.|:|:||||||.
  Rat   442 TGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDG 506

  Fly   640 IGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILY 704
            :...|     ||....:...:::.||..:||::....:.::.||||.|.||.||.||||.||...
  Rat   507 LAPVR-----SSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFL 566

  Fly   705 VGLPQCEARREILKIKLRAM-PISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSF 763
            ..||...||:.||:|..|.. |..:|..:.:|.:...||.||:|:|:|.||||.||.:.:
  Rat   567 FNLPDQRARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRY 626

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5776	NP_609585.1	CDC48	183..797	CDD:273521	143/515 (28%)
Atad2b	XP_038969041.1	RecA-like_Yta7-like	398..567	CDD:410925	71/173 (41%)
		AAA_lid_3	592..632	CDD:465537	15/35 (43%)
		P-loop containing Nucleoside Triphosphate Hydrolases	755..891	CDD:476819
		Bromo_AAA	956..1067	CDD:99957