DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5776 and NSF

DIOPT Version :10

Sequence 1:NP_609585.1 Gene:CG5776 / 34680 FlyBaseID:FBgn0032450 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_006169.2 Gene:NSF / 4905 HGNCID:8016 Length:744 Species:Homo sapiens


Alignment Length:373 Identity:114/373 - (30%)
Similarity:185/373 - (49%) Gaps:77/373 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 IDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADLAN 491
            |:.:.|||.:          |.|::..|.:|...|:.. ..|::.|:.|:.:           .|
Human   152 IEAMDPSILK----------GEPATGKRQKIEVGLVVG-NSQVAFEKAENSS-----------LN 194

  Fly   492 LVYAAMLQAQPNPLQMPHLQAALTRIKPSAMREVLIECPNVQWS----DIGG-QSELRLAMQQAI 551
            |:..|                     |....|:.:|   |..|:    .||| ..|.....::|.
Human   195 LIGKA---------------------KTKENRQSII---NPDWNFEKMGIGGLDKEFSDIFRRAF 235

  Fly   552 EWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKAL-----ATESKLNFLSIKGPELFSMWVG 611
            ...:...:..:::|.|..:|||::|||||.||::|:.:     |.|.|:    :.|||:.:.:||
Human   236 ASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVG 296

  Fly   612 ESERAVREVFRKARQVAPA--------IVFFDEIDAIGGERSEGDGSSSGSS-VKERVLTQLLTE 667
            |||..:|::|..|.:....        |:.|||||||..:|    ||.:||: |.:.|:.|||::
Human   297 ESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR----GSMAGSTGVHDTVVNQLLSK 357

  Fly   668 LDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMP----ISN 728
            :||||.|.|:.::..|||||:||:|||||||::..:.:|||..:.|.:||.|....|.    :|.
Human   358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSA 422

  Fly   729 DVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAEDVKWTDFEHA 776
            |||:::|...|:.:||||::.:...|...|:.:..:|......|.|.|
Human   423 DVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKA 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5776NP_609585.1 CDC48 183..797 CDD:273521 114/373 (31%)
NSFNP_006169.2 CDC48_N 6..83 CDD:215012
CDC48_2 111..183 CDD:215011 9/41 (22%)
CDC48 159..>606 CDD:273521 111/366 (30%)
RecA-like_NSF-SEC18_r1-like 219..395 CDD:410912 70/183 (38%)
Blue background indicates that the domain is not in the aligned region.

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