Protein Alignment CG5776 and Nsf2

DIOPT Version :10

• Sequence 1: NP_609585.1
• Gene: CG5776 / 34680
• FlyBaseID: FBgn0032450
• Length: 799
• Species: Drosophila melanogaster
• Sequence 2: NP_788676.1
• Gene: Nsf2 / 41694
• FlyBaseID: FBgn0266464
• Length: 752
• Species: Drosophila melanogaster
• Alignment Length: 514
• Identity: 134/514 - (26%)
• Similarity: 221/514 - (42%)
• Gaps: 140/514 - (27%)

  Fly   377 IEDVHNL----CPKQE----------NSDLVKRV---------SLAFLSLLDQLSSPS------- 411
            ||..|.:    ||..|          .||..:.|         .|.::..|:::|.|.
  Fly     3 IEKAHRMRAIKCPTDELSLTNKAIVNVSDFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVG 67

  Fly   412 -QLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVEL----------------------------- 446
             .|...|...|:.:.:||.      |..|.|...::
  Fly    68 FSLVQRKWATLSINQEIDV------RPYRFDASADIITLVSFETDFLQKKTTTQEPYDSDEMAKE 126

  Fly   447 ------GAPSSQAR-----------LEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADLANLVY 494
                  |.|.:..:           |.:....:::|:.:...:.:....::..|.:   |.|.|
  Fly   127 FLMQFAGMPLTVGQTLVFQFKDKKFLGLAVKTLEAVDPRTVGDSLPKTRNVRFGRI---LGNTV- 187

  Fly   495 AAMLQAQPNPLQMPHLQAALTRIKPSAMREVLIECPNVQWS----DIGG-QSELRLAMQQAIEWP 554
               :|.:.....:.:||.   |.|...:|:.:|   |..|.    .||| ..|.....::|....
  Fly   188 ---VQFEKAENSVLNLQG---RSKGKIVRQSII---NPDWDFGKMGIGGLDKEFNAIFRRAFASR 243

  Fly   555 LLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALAT-----ESKLNFLSIKGPELFSMWVGESE 614
            :...:..::||||..:|||::||||..||::|:.:.|     |.|:    :.||::...:|||||
  Fly   244 VFPPELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI----VNGPQILDKYVGESE 304

  Fly   615 RAVREVFRKA----RQVAP----AIVFFDEIDAIGGERSEGDGSSSGSS-VKERVLTQLLTELDG 670
            ..:|.:|.:|    :::.|    .|:.|||||||...|    ||.:|:| |.:.|:.|||.::||
  Fly   305 ANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKAR----GSVAGNSGVHDTVVNQLLAKIDG 365

  Fly   671 VEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLRAM----PISNDVD 731
            ||.|.|:.::..|||.||||:|||||||::..:.:.||..:.|.:||.|..:.|    .|::|||
  Fly   366 VEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVD 430

  Fly   732 MEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAED-------------VKWTDFEHAL 777
            ..::...|:.:||||::.:...|...|:.:..:|:.             |...||.|||
  Fly   431 NNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKLRVTRADFLHAL 489

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5776	NP_609585.1	CDC48	183..797	CDD:273521	134/514 (26%)
Nsf2	NP_788676.1	CDC48_N	9..89	CDD:215012	16/85 (19%)
		CDC48_2	117..>170	CDD:215011	4/52 (8%)
		RecA-like_NSF-SEC18_r1-like	224..400	CDD:410912	71/183 (39%)
		CDC48	<225..>611	CDD:273521	96/273 (35%)