Protein Alignment CG5776 and CG12010

DIOPT Version :10

• Sequence 1: NP_609585.1
• Gene: CG5776 / 34680
• FlyBaseID: FBgn0032450
• Length: 799
• Species: Drosophila melanogaster
• Sequence 2: NP_728878.1
• Gene: CG12010 / 38421
• FlyBaseID: FBgn0035443
• Length: 717
• Species: Drosophila melanogaster
• Alignment Length: 800
• Identity: 220/800 - (27%)
• Similarity: 353/800 - (44%)
• Gaps: 180/800 - (22%)

  Fly    14 WYHCESCGVHIPSKARDNHEGLCFAISQDDVGPDSEAEYVRSGAI--YTR--SLQQRNFEVESLK 74
            ||.|..|         |....:|:...:    ..||......|.:  .||  ...||...:|.||
  Fly    39 WYRCHLC---------DGSYAVCWVTPR----AGSETCCFLDGIVTSLTRFSPTNQRLVLLEPLK 90

  Fly    75 DLP-TKYANMLVFVSEGAMQLAQLHIGQHVVLEAPSTAEQPL---VRIVWPTSEQFLTTVFVSEG 135
            .:| .|..:.::.|::             .:|:.|..:.:.|   |||       ||..:.:::|
  Fly    91 LVPCVKRISCVITVTQ-------------ELLQRPPVSLEDLKDDVRI-------FLRHLKLTKG 135

  Fly   136 DFKLHCTQLRGKLLKISALHPSRLTAAASISLKHVNTTETSLKSVQLQDAIALLKRDMVNRVFYK 200
                 |                        |::|....:..:.||::.||..:...:........
  Fly   136 -----C------------------------SVQHRRLVQLGIASVEIFDAPGVADDECFEIAHDA 171

  Fly   201 DSLI---------HMNFFNKSLTFRLERWQSTVEEALAGLSLDSKPLQFIQVTNVTKLHLITDDA 256
            :.|:         .::|..|.|....||....:|:.|
  Fly   172 ELLLADIRLGMPFSLDFIFKYLPHSFERPMEQLEKLL---------------------------- 208

  Fly   257 NQQEEEQKI--SHRITKCQIGGLDRQLQLVEESMEYALGFRTLPAGLRVSRGLLLYGATGCGKSM 319
                |..||  |||                         |.|.         .|:.|...||||.
  Fly   209 ----ETSKISFSHR-------------------------FPTT---------ALVVGPVDCGKSG 235

  Fly   320 VLEAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPH-----PTLLLIED 379
            :|      :|...:.......|.:.:|...:.||||::|..||:.|......     |.::||||
  Fly   236 LL------SEFLRRHSCNCFYITASQVLRSYPGETEEELRRIFQAAQTFKEKLRPLLPIVILIED 294

  Fly   380 VHNLCPK-----QENSDLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGR 439
            :..|||.     .:||....|:|.....|||.|.     :|  ...||||...|:||...||  |
  Fly   295 LELLCPSTAVADAKNSSNSLRISAELYKLLDALP-----RG--IICLATSGVPDSLHEHARR--R 350

  Fly   440 LDNEVELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADLANLVYAAMLQ-AQPN 503
            ...||.:..||...|.::|..|.:..|..:|...:||:|..|.|||.|||..|:.....| ...:
  Fly   351 FVREVTINMPSEGQRRQLVEHLCEVHELNISQTLLEHIARNTQGYVIADLTLLLRRVQQQLLTKD 415

  Fly   504 PLQMPHL-QAALTRIKPSAMR--EVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLG 565
            ...:.|: ..:|::.:|||.|  :|.:......:..|||...|:..:|.::...:..:..|.|.|
  Fly   416 DFDIEHIFLKSLSQTQPSASRSTDVRVSKMTAGFEVIGGMEALKRTLQVSVLAGIRQSAAFARFG 480

  Fly   566 IKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPA 630
            :..|:|:|::|||||:||.:||.||.|:.:.|::....|::|.:||.:||.:..:|..||:.||.
  Fly   481 LSLPKGVLLYGPPGCAKTTVAKCLAKEADMTFIATSAAEVYSPYVGCAERFISRIFDTARKNAPC 545

  Fly   631 IVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGV---EALQNVTIVAATNRPDMIDKA 692
            ::|.||||::.|.|:...| ..|..|:.|:|:.||||::|:   .:.|::.:|||||||||||.|
  Fly   546 LIFLDEIDSLVGRRTVSSG-GGGGQVQLRILSTLLTEMNGIVGGGSQQHILVVAATNRPDMIDDA 609

  Fly   693 LLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALR 757
            ||||||.|::::|..|..::|..:||:..:.||...:|.::::...|:.||||::..:|:|||:.
  Fly   610 LLRPGRFDKLIHVPAPDEKSRLALLKLHSQRMPFHENVFLQEIAARTDRYSGADLCNLCNEAAIE 674

  Fly   758 ALEQSFEAEDVKWTDFEHAL 777
            |.::.|:|.:::..|||..|
  Fly   675 AFQRDFKATEIELQDFEKVL 694

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5776	NP_609585.1	CDC48	183..797	CDD:273521	186/622 (30%)
CG12010	NP_728878.1	CDC48	<220..713	CDD:273521	169/499 (34%)