DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5776 and atad1a

DIOPT Version :10

Sequence 1:NP_609585.1 Gene:CG5776 / 34680 FlyBaseID:FBgn0032450 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_001004640.1 Gene:atad1a / 368672 ZFINID:ZDB-GENE-030616-593 Length:380 Species:Danio rerio


Alignment Length:275 Identity:88/275 - (32%)
Similarity:149/275 - (54%) Gaps:29/275 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   532 VQWSDIGGQSELRLAMQQAIEWPL--LHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALATESK 594
            |.|.|:.|..|:...||..:..|.  .|.....:| ::||:|:|::|||||.||:||||.|..|.
Zfish    91 VTWRDVAGLDEIISEMQDTVILPFQKRHLFSGSKL-LQPPKGVLLYGPPGCGKTLIAKATAKASG 154

  Fly   595 LNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKER 659
            ..|::::...|...|.|||::....||..|.::.|.|:|.||||:....||..|..::.     .
Zfish   155 CRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDHEATA-----M 214

  Fly   660 VLTQLLTELDGVEALQN--VTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLR 722
            :..|.::..||::..:|  |.::.|||||..:|.|:||  |:....:||||....|.|||::.|.
Zfish   215 MKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLILS 277

  Fly   723 AMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAA------------LRALEQSFEAEDVKWTDFEH 775
            ...:||.::::::...:|||||::::.:|.:||            ::.:.|.|:.::    :.||
Zfish   278 GENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVRDYVRKQQMKQIAQQFQLDE----EEEH 338

  Fly   776 A-LKAVPPRTSPELL 789
            . .:.:.|.|..:||
Zfish   339 VDSRQLRPVTQLDLL 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5776NP_609585.1 CDC48 183..797 CDD:273521 88/275 (32%)
atad1aNP_001004640.1 SpoVK 1..343 CDD:440232 84/263 (32%)
RecA-like_ATAD1 95..260 CDD:410928 59/172 (34%)

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