DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5776 and Fignl1

DIOPT Version :10

Sequence 1:NP_609585.1 Gene:CG5776 / 34680 FlyBaseID:FBgn0032450 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_001011913.1 Gene:Fignl1 / 289777 RGDID:1307112 Length:677 Species:Rattus norvegicus


Alignment Length:312 Identity:110/312 - (35%)
Similarity:174/312 - (55%) Gaps:23/312 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   500 AQPNPLQMPHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRL 564
            |:|..|....|:....|:....|.|::...|.|.|.||.|....:..:::.:.||::..|.|  .
  Rat   369 AEPAHLTDDRLKNVEPRMVELIMNEIMDHGPPVHWEDIAGVEFAKATIKEIVVWPMMRPDIF--T 431

  Fly   565 GIK-PPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVA 628
            |:: ||:|||:|||||..||:|.|.:|::|...|.||....|.|.||||.|:.||.:|..||...
  Rat   432 GLRGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQ 496

  Fly   629 PAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDG--VEALQNVTIVAATNRPDMIDK 691
            ||::|.||||::..:|.:|:..||     .|:.|:.|.:|||  ..:...:.:|.|||||..||:
  Rat   497 PAVIFIDEIDSLLSQRGDGEHESS-----RRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDE 556

  Fly   692 ALLRPGRIDRILYVGLPQCEARREI-LKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAA 755
            |..|  |:.:.||:.||:..||::| :.:..:......|.:.|.:||.::|:|||::..:|.||:
  Rat   557 AARR--RLVKRLYIPLPEASARKQIVVNLMSKEQCCLTDEETELVVQQSDGFSGADMTQLCREAS 619

  Fly   756 LRALEQSFEAE----------DVKWTDFEHALKAVPPRTSPELLKLYEDYLK 797
            |..:.....|:          .:.:.|||:|.:.|.|..||:.|:|||::.|
  Rat   620 LGPIRSLHTADIATISPDQVRPIAYIDFENAFRTVRPSVSPKDLELYENWNK 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5776NP_609585.1 CDC48 183..797 CDD:273521 109/310 (35%)
Fignl1NP_001011913.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..232
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..324
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 337..378 3/8 (38%)
RecA-like_Figl-1 383..568 CDD:410933 74/193 (38%)
AAA_lid_3 593..>624 CDD:465537 12/30 (40%)
Vps4_C <634..674 CDD:462762 13/38 (34%)
Blue background indicates that the domain is not in the aligned region.

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