DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5776 and atad2

DIOPT Version :10

Sequence 1:NP_609585.1 Gene:CG5776 / 34680 FlyBaseID:FBgn0032450 Length:799 Species:Drosophila melanogaster
Sequence 2:XP_012820627.1 Gene:atad2 / 100496913 XenbaseID:XB-GENE-995542 Length:1366 Species:Xenopus tropicalis


Alignment Length:382 Identity:120/382 - (31%)
Similarity:194/382 - (50%) Gaps:75/382 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 ATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSVEH-QLSDEEVEHVASITHGYV 485
            :|||..|......||..|..|:.            |.|||..:::. .|...:.:.:.      :
 Frog   358 STSSSSDDEQHFERRLNRSRNKA------------ISRCLPLNLQRDDLKGIQKDRMK------I 404

  Fly   486 GADLANLVYAAMLQAQPNPLQMPHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQA 550
            ||.||::          :|:|:.                     ..|::|.:||.|:...::::.
 Frog   405 GASLADV----------DPMQID---------------------ATVRFSSVGGLSKHISSLKEM 438

  Fly   551 IEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALATESKLN-----FLSIKGPELFSMWV 610
            :.:|||:.:.|::..|:||||.|.:||||..||::|:|||.|..:.     |...||.:..|.||
 Frog   439 VVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSIGDRRVAFFMRKGADCLSKWV 503

  Fly   611 GESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQ 675
            |||||.:|.:|.:|.|:.|:|:||||||.:...|     ||....:...:::.||..:||:::..
 Frog   504 GESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVR-----SSRQDQIHSSIVSTLLALMDGLDSRG 563

  Fly   676 NVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLRAM-PISNDVDMEKLVQLT 739
            .:.::.||||.|.||.||.||||.||.....||..|||::||||..:.. |..:|:.:::|.:..
 Frog   564 EIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDQEARKDILKIHTKEWNPKPSDLFLDELSEKC 628

  Fly   740 EGYSGAEIQAVCHEAALRALEQSF------------EAEDVKWT--DFEHALKAVPP 782
            .||.||:|::||.||||.:|.:.:            :.:.:|.|  ||..|::.:.|
 Frog   629 VGYCGADIKSVCAEAALCSLRRRYPQIYTTTEKLQLDVDSIKITAKDFITAMQKIVP 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5776NP_609585.1 CDC48 183..797 CDD:273521 120/382 (31%)
atad2XP_012820627.1 RecA-like_Yta7-like 424..593 CDD:410925 69/173 (40%)
AAA_lid_3 618..655 CDD:465537 14/36 (39%)
P-loop containing Nucleoside Triphosphate Hydrolases 773..890 CDD:476819
Bromo_AAA 981..1092 CDD:99957
Blue background indicates that the domain is not in the aligned region.

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