DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17036 and LOC549052

DIOPT Version :10

Sequence 1:NP_609584.1 Gene:CG17036 / 34679 FlyBaseID:FBgn0032449 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_001016298.1 Gene:LOC549052 / 549052 XenbaseID:XB-GENE-29098983 Length:352 Species:Xenopus tropicalis


Alignment Length:289 Identity:110/289 - (38%)
Similarity:159/289 - (55%) Gaps:22/289 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WLKISLLLCTFGFFREFRPSEPYVTEYLASDYGNLTTDQIYQDVYPFGTYSVLAQLVIVFLITDL 68
            |...:..||.:|.....|..||::..||...:.|||.:|:...|:|..|||.||.|:.|||:||.
 Frog    12 WKYPTFFLCLYGLCANLRAVEPFIAAYLIGPHHNLTAEQVTTSVFPVWTYSYLAALIPVFLLTDY 76

  Fly    69 VRYKPVIVLSALAGITLFSMLIWTETVGMLQVAQVFFGTFTAAEVAYYTYMYAKVNKEQYQVVTG 133
            :||||||::..|.......:|:.|..|..:||.:.|:..|||.:.|||.|:|:.|:...||.|||
 Frog    77 LRYKPVIIMQGLGMSISLLLLLLTHGVPAMQVMEFFYAIFTACDPAYYAYIYSVVDTAHYQRVTG 141

  Fly   134 HTRAAILSGKFLGGLFAQILVSTDSMDYRQLHYLSLATQLISLAVSLFLPSVPRSLYFY---AG- 194
            :.|:..|.|..||.:..|:|||...:.|..|:.:||.:..::...|||||....|::.:   || 
 Frog   142 YCRSITLVGVTLGAIIGQMLVSLAGVSYVYLNVISLTSTSVAFLFSLFLPMPSSSMFVHRKMAGD 206

  Fly   195 -------------SEKITIADGEETSPKFSFANA-CRLLW---YHLVSSYSNPVVLQWSIWWALA 242
                         ||:...|.|.||..|.:.:|. .::||   ..:...||:..:|.||:|||.|
 Frog   207 TTNILSQELESPHSEQTQSATGTETENKSTGSNKFLQVLWRLGKEMKECYSSMKILYWSLWWAFA 271

  Fly   243 TCGQVQVISYIQFLWKEVAPN-KLSVYNG 270
            |.|..|||:|:|.||:.|||: |.|:|||
 Frog   272 TAGYTQVINYVQILWEHVAPSEKFSIYNG 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17036NP_609584.1 Folate_carrier 2..395 CDD:460318 110/289 (38%)
LOC549052NP_001016298.1 Folate_carrier 10..>300 CDD:474932 108/287 (38%)

Return to query results.
Submit another query.