DRSC/TRiP Functional Genomics Resources

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Protein Alignment PICK1 and pick1

DIOPT Version :9

Sequence 1:NP_001285881.1 Gene:PICK1 / 34677 FlyBaseID:FBgn0032447 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_001039225.2 Gene:pick1 / 734086 XenbaseID:XB-GENE-959376 Length:421 Species:Xenopus tropicalis


Alignment Length:395 Identity:228/395 - (57%)
Similarity:291/395 - (73%) Gaps:2/395 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 SGDRFGIESASRQKYELDRL-GMTVSTNAVVITKDQSNLIGISIGGGAPMCPCLYIVQIFDGTPA 133
            ||..|....:..:...|.|. |:......|.:.||..|:|||||||||..||||||||:||.|||
 Frog    10 SGPSFAFSKSQLKTMALRRNGGIPTVPGTVTLKKDSQNVIGISIGGGAQHCPCLYIVQVFDNTPA 74

  Fly   134 AREGSLQSGDELLAVNSVSVKGKTKVEVAKMIQTATDEVVIHYNKLHADPEQGKTLDIILKKLKH 198
            :.:|::.:|||:..||..|||||||||||||||....||.||||||.|||:|||:|||:|||:||
 Frog    75 SLDGTIAAGDEITGVNGKSVKGKTKVEVAKMIQNVKGEVTIHYNKLQADPKQGKSLDIVLKKVKH 139

  Fly   199 RIVDNLSSNTADTLGLSRAILCNDSLVKRLEELEGTELMYKGLVEHARRMLKAYYDLLQTYKSFG 263
            |:|:||||.|||.|||||||||||.|||||||||.|...|:|::||.:|:|:::::|.||:::||
 Frog   140 RLVENLSSGTADALGLSRAILCNDGLVKRLEELEKTGEFYRGMMEHTKRLLRSFFELSQTHRAFG 204

  Fly   264 DCFTQISVHEPQQRASEAFRTFGEFHRTLEKDGLGIIKQIKPVLADLGTYLNKAIPDTKLTVRRY 328
            |.|:.|.|.|||..|||||..|.:.||::||.|:|::|.|||:|:||.|||||||||||||:|:|
 Frog   205 DVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIGLLKTIKPMLSDLNTYLNKAIPDTKLTIRKY 269

  Fly   329 ADAKFTYLSYCLKVKEMDDEEHGFAALQEPLYRVETGNYEYRLILRCRQDARSKFAKLRTDVLEK 393
            .|.||.|||||||||||||||:...||.||||||.||||||||||||||:||::|||:|.|||||
 Frog   270 LDVKFEYLSYCLKVKEMDDEEYSSIALGEPLYRVGTGNYEYRLILRCRQEARARFAKMRKDVLEK 334

  Fly   394 MELLECKHAMDLNKQLRSLLESLAELHRSLVDRLDSLPPLFPIEVDFKETDFQYKSSTLKPQELD 458
            :|||:.||..|:..||:..:.::::.:....:.|.. ..:||||||..:|...|.........:|
 Frog   335 IELLDQKHVHDIVFQLQRFVSAMSKYNDQCYEVLKE-ADIFPIEVDLAKTTLAYGQGDTFTDGID 398

  Fly   459 DDEIE 463
            ::|.|
 Frog   399 EEEEE 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PICK1NP_001285881.1 PDZ_signaling 98..174 CDD:238492 49/75 (65%)
BAR_PICK1 221..436 CDD:153343 125/214 (58%)
pick1NP_001039225.2 PDZ_signaling 38..115 CDD:238492 49/76 (64%)
BAR_PICK1 162..376 CDD:153343 125/214 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 304 1.000 Domainoid score I1371
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H7470
Inparanoid 1 1.050 444 1.000 Inparanoid score I1599
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D251076at33208
OrthoFinder 1 1.000 - - FOG0006414
OrthoInspector 1 1.000 - - oto105212
Panther 1 1.100 - - LDO PTHR12141
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4679
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.160

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