DRSC/TRiP Functional Genomics Resources

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Protein Alignment PICK1 and Arfip

DIOPT Version :9

Sequence 1:NP_001285881.1 Gene:PICK1 / 34677 FlyBaseID:FBgn0032447 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_650058.1 Gene:Arfip / 41353 FlyBaseID:FBgn0037884 Length:355 Species:Drosophila melanogaster


Alignment Length:348 Identity:74/348 - (21%)
Similarity:131/348 - (37%) Gaps:76/348 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 IGISIGG--GA--------------PMCPCLYIVQIFDGTPAAREGSLQSGDELLAVNSVSVKGK 156
            :|:.:||  ||              ||.|         .:|.:..|.|...|.  ...|:.....
  Fly    54 VGVGVGGPFGAPSSLPLRNHSAPTTPMSP---------SSPPSGNGILSPTDS--GSGSIIRTSA 107

  Fly   157 TKVEVAKMIQTATDEVVIHYNKLHADPEQGKTLDIILKKLKHRIVDNLSSNTADTLGLSRAILCN 221
            :|::..|....:|.:.               |..|:|:||      ..|..|.|:          
  Fly   108 SKIDSLKNWSISTYKC---------------TRQIMLEKL------GKSQRTVDS---------- 141

  Fly   222 DSLVKRLEELEGTELMYKGLVEHARRMLKAYYDLLQTYKSFGDCFTQISVHEPQQRASEAFRTFG 286
             .|..::|:|..|:..|..::...|.....:..::.|..:..|.|..::...|:  ..:.|....
  Fly   142 -ELEAQIEQLRETQRKYLSILRLTRAFSSHFQHVVVTQHALADSFADLAQKNPE--LQKEFTCNS 203

  Fly   287 EFHRTLEKDGLGIIKQIKPVLADLGTYLNKAIPDTKLTVRRYADAKFTYLSYCLKVKEMDDE-EH 350
            |..|.|.|:|..::..:...::.:.|..||.|.||.||:|:|..|:..:.:|.:.::....| ..
  Fly   204 ETQRNLTKNGELLLNALNFFISSVNTLCNKTIDDTLLTIRQYETARIEFDAYRMDLENTKPELTP 268

  Fly   351 GFAALQEPLYRVETGNYEYRLILRCRQDARSKFAKLRTDVLEKMELLECKHAMDLNKQLRSLLES 415
            ...||:|              ..|.....:.::.|||:||..||:.|:......::|||..|..:
  Fly   269 SAVALEE--------------TQRSYAQHKEQYEKLRSDVAVKMQFLDENRIKVMHKQLILLHNA 319

  Fly   416 LAELHRSLVDRLDSLPPLFPIEV 438
            :|.........|:|....|.|::
  Fly   320 IAAYFSGNAMALESTLKQFNIKL 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PICK1NP_001285881.1 PDZ_signaling 98..174 CDD:238492 16/81 (20%)
BAR_PICK1 221..436 CDD:153343 49/215 (23%)
ArfipNP_650058.1 BAR_Arfaptin 140..338 CDD:153344 49/224 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439107
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12141
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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