DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PICK1 and Pick1

DIOPT Version :10

Sequence 1:NP_001285881.1 Gene:PICK1 / 34677 FlyBaseID:FBgn0032447 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_032863.2 Gene:Pick1 / 18693 MGIID:894645 Length:416 Species:Mus musculus


Alignment Length:380 Identity:224/380 - (58%)
Similarity:284/380 - (74%) Gaps:4/380 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 ELDRLGMTVSTNAVVITKDQSNLIGISIGGGAPMCPCLYIVQIFDGTPAAREGSLQSGDELLAVN 149
            |.|:||:......|.:.||..|||||||||||..||||||||:||.||||.:|::.:|||:..||
Mouse    10 EEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVN 74

  Fly   150 SVSVKGKTKVEVAKMIQTATDEVVIHYNKLHADPEQGKTLDIILKKLKHRIVDNLSSNTADTLGL 214
            ..|:|||||||||||||....||.||||||.|||:||.:|||:|||:|||:|:|:||.|||.|||
Mouse    75 GKSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKKVKHRLVENMSSGTADALGL 139

  Fly   215 SRAILCNDSLVKRLEELEGTELMYKGLVEHARRMLKAYYDLLQTYKSFGDCFTQISVHEPQQRAS 279
            ||||||||.|||||||||.|..:|||:.||.:.:|:|:|:|.||:::|||.|:.|.|.|||..||
Mouse   140 SRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAAS 204

  Fly   280 EAFRTFGEFHRTLEKDGLGIIKQIKPVLADLGTYLNKAIPDTKLTVRRYADAKFTYLSYCLKVKE 344
            |||..|.:.||::||.|:.::|.|||:|.||.||||||||||:||:::|.|.||.||||||||||
Mouse   205 EAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKE 269

  Fly   345 MDDEEHGFAALQEPLYRVETGNYEYRLILRCRQDARSKFAKLRTDVLEKMELLECKHAMDLNKQL 409
            |||||:...||.||||||.||||||||||||||:||::|:::|.|||||||||:.||..|:..||
Mouse   270 MDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQL 334

  Fly   410 RSLLESLAELHRSLVDRLDSLPPLFPIEVDFKETDFQY---KSSTLKPQELDDDE 461
            :..:.::::.:......|.. ..:||||||...|...|   :.|....:|.|::|
Mouse   335 QRFVSTMSKYYNDCYAVLQD-ADVFPIEVDLAHTTLAYGPNQGSFTDGEEEDEEE 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PICK1NP_001285881.1 PDZ_PICK1-like 96..179 CDD:467205 54/82 (66%)
BAR_PICK1 221..436 CDD:153343 123/214 (57%)
Pick1NP_032863.2 PDZ_PICK1-like 21..104 CDD:467205 54/82 (66%)
BAR_PICK1 146..360 CDD:153343 123/214 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 373..416 4/16 (25%)

Return to query results.
Submit another query.