Protein Alignment IFT43 and Ift43

DIOPT Version :10

• Sequence 1: NP_609581.3
• Gene: IFT43 / 34676
• FlyBaseID: FBgn0032446
• Length: 229
• Species: Drosophila melanogaster
• Sequence 2: XP_017449588.1
• Gene: Ift43 / 299209
• RGDID: 1307392
• Length: 248
• Species: Rattus norvegicus
• Alignment Length: 242
• Identity: 73/242 - (30%)
• Similarity: 114/242 - (47%)
• Gaps: 55/242 - (22%)

  Fly     1 MDWAEELKMTIRKTTARKGRRSKSRDVLKEEDVQAAG--GSKDISIDITLNVQAGTPPTTSDTAT 63
            :|..||.:.:...:.|:.|||:      ::|..||..  .||:.|:     .|.|...|....
  Rat     5 LDLGEEKRRSSATSGAKMGRRA------QQESTQAENYLNSKNSSL-----TQTGEMVTMEPL-- 56

  Fly    64 SSTYNNEFESHRPPIR--RISGGWADSGLK----GLKS-------------------------KK 97
                 :|.|...||.:  |..|||||..:|    ||.|                         ||
  Rat    57 -----DECEDQTPPPKPPRRQGGWADESMKVAKHGLSSPGKLWNAVDDMDGRRSPAQFLTGLGKK 116

  Fly    98 NS--FDDERFKQTKSATNSIPTDDIPVIPDMDDVKDEIMLNEIVEPPTIGTSRSAVLKEANSDLL 160
            .|  .:|.|.:| ::.|.:...:|||||||::||::|..:.::..||:|..:|....::.::||:
  Rat   117 VSEEMEDRRLRQ-QNLTGTEEGEDIPVIPDLEDVQEEDFVLQVASPPSIQVNRVMTYRDLDNDLM 180

  Fly   161 SQYAFSAVDG-FDLSILTDCLVPQESLNEKDDLWQWDKLFTEVTAEI 206
            ...||..:|| .||.:||..|.|:..:.|.|..|.||.|:|||::|:
  Rat   181 KYSAFQTLDGEIDLKLLTKVLAPEHEVREDDVGWDWDHLYTEVSSEL 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
IFT43	NP_609581.3	IFT43	85..210	CDD:464631	50/154 (32%)
Ift43	XP_017449588.1	IFT43	114..232	CDD:464631	43/115 (37%)