DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT4 and TCP1

DIOPT Version :10

Sequence 1:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_010498.1 Gene:TCP1 / 851798 SGDID:S000002620 Length:559 Species:Saccharomyces cerevisiae


Alignment Length:534 Identity:169/534 - (31%)
Similarity:275/534 - (51%) Gaps:29/534 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DKSKPTDVRLSNIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEVSITNDGATILKQMNVLHPAAKM 83
            :|....|:|..|:.|..||::.:::||||.|:|||:....|:.::||||||||..::|.|||.|:
Yeast    18 EKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKI 82

  Fly    84 LVELSRAQDVAAGDGTTSVVVIAGALLEACEKLLQKGLHPTAISDSFQRCSNKAVEILKQ-MSTP 147
            ||||::.||...||||||||:||..||:...:|::..:|||.|...|:....:|:..:.: :||.
Yeast    83 LVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTS 147

  Fly   148 IELDDRETLIKSASTSLNSKVVSQQSSLLAPIAVDAVLKV-TDPGK-ETSVDLKNIKVISSLGGT 210
            ::...:||||..|.||::||::...|...:.:.|||:|.| |...| |....:|.:.|:.:.|.:
Yeast   148 VDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKS 212

  Fly   211 VEDTELVDGLVFTCRSAGSNAPKRIE--KAKIGLIQFCISAPKTDMDHNVIVSDYAAMDRVLKEE 273
            ..::.||.|....|..|....||||.  ..||..:...:...:..|...:.:.|...::::.|.|
Yeast   213 ATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKRE 277

  Fly   274 RSYILNIVKQIKKSGCNVLLVQKSILRDAVSDLAQHFLDKIKCMVVKDVEREDIEFVCKTLHCRP 338
            ...:|..||:|..:|..|:|..|.|     .||......:.|.|.|:..::||:..:.:......
Yeast   278 AGIVLERVKKIIDAGAQVVLTTKGI-----DDLCLKEFVEAKIMGVRRCKKEDLRRIARATGATL 337

  Fly   339 IASLDH------FTAENLSSADLVEEVASGTNKFVKITGIQNMGRTVSIICRGSNKLVLEEAARS 397
            ::|:.:      |.:..|...|.|.:.....::.:.|.|......: |||.||:|...|:|..||
Yeast   338 VSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSS-SIILRGANDYSLDEMERS 401

  Fly   398 LHDALCVVRCLVKLRAQIVGGGAPEIEMALQLAALAQTVEGVDAYCFRAFADALEVIPSTLAENA 462
            |||:|.||:..::....:.|||..|..:.:.|...|.||...:......||.||.:||.|||.||
Yeast   402 LHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNA 466

  Fly   463 GLNPIATVTELRNRHAQGE------------KNAGINVRKGAITDIFAENVVQPLLVSISSITLA 515
            ..:....|.:||:.||..:            :|.|:::.:|.|.|.....|::|.:..:.|:..|
Yeast   467 AKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSA 531

  Fly   516 TETIRSILKIDDIV 529
            .|...:||:||.::
Yeast   532 LEACVAILRIDTMI 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 169/534 (32%)
TCP1NP_010498.1 TCP1_alpha 17..549 CDD:239451 169/534 (32%)

Return to query results.
Submit another query.