DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT4 and HSP60

DIOPT Version :9

Sequence 1:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_013360.1 Gene:HSP60 / 850963 SGDID:S000004249 Length:572 Species:Saccharomyces cerevisiae


Alignment Length:563 Identity:130/563 - (23%)
Similarity:213/563 - (37%) Gaps:125/563 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RLSNIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEVSITNDGATILKQMNVL-----HPAAKMLVE 86
            |.|.::..:.:::|:..:|||:|.:.:|:...|...||.||.|:.|.: ||     :..||:|.|
Yeast    34 RASLLKGVETLAEAVAATLGPKGRNVLIEQPFGPPKITKDGVTVAKSI-VLKDKFENMGAKLLQE 97

  Fly    87 LSRAQDVAAGDGTTSVVVIAGALLEACEKLLQKGLHPTAISDSFQRCSNKAVEILKQMSTPIELD 151
            ::...:.||||||||..|:..|:.....|.:..|.:|..:....|....|.:|.|.  :...|:.
Yeast    98 VASKTNEAAGDGTTSATVLGRAIFTESVKNVAAGCNPMDLRRGSQVAVEKVIEFLS--ANKKEIT 160

  Fly   152 DRETLIKSASTSLNSKVVSQQSSLLAPIAVDAVLKVTDPGKETSVDLKNIKVISSLGGTVED-TE 215
            ..|.:.:.|:.|.|..  |....|||    .|:.||   |||..:.::.       |.|:|| .|
Yeast   161 TSEEIAQVATISANGD--SHVGKLLA----SAMEKV---GKEGVITIRE-------GRTLEDELE 209

  Fly   216 LVDGLVFTCRSAGSNAPKRIEKAKIGLIQFCISAPKTDMDHNVI--VSDYAAMDRVLKEERSYIL 278
            :.:|:.|   ..|..:|..|...|...::|  ..|...:....|  :.|......:..:.|..:|
Yeast   210 VTEGMRF---DRGFISPYFITDPKSSKVEF--EKPLLLLSEKKISSIQDILPALEISNQSRRPLL 269

  Fly   279 NIVKQIKKSGCNVLLVQKSILRDAV----------SDLAQHFLDKIKCMVVKDVEREDIEFVCKT 333
            .|.:.:........::.|  ||..|          .|..::.:..|..:....|..|:::.  |.
Yeast   270 IIAEDVDGEALAACILNK--LRGQVKVCAVKAPGFGDNRKNTIGDIAVLTGGTVFTEELDL--KP 330

  Fly   334 LHCRPIASLDHFTAENLSSADLVEEVASGTNKFVKITG----------IQNMGRTVSIICRGS-N 387
            ..|         |.|||.|.|.:......|   |.:.|          |:.:..::.|....| .
Yeast   331 EQC---------TIENLGSCDSITVTKEDT---VILNGSGPKEAIQERIEQIKGSIDITTTNSYE 383

  Fly   388 KLVLEEAARSLHDALCVVRCLVKLRAQIVGGGAPEIEM---------ALQLAALAQTVEGVDAYC 443
            |..|:|....|...:.|:|.          |||.|:|:         ||. |..|...||:....
Yeast   384 KEKLQERLAKLSGGVAVIRV----------GGASEVEVGEKKDRYDDALN-ATRAAVEEGILPGG 437

  Fly   444 FRAFADALEVIPST------------------------LAENAGLNPIATVTELRNRHAQGEKNA 484
            ..|...|..|:...                        :.||||......:.:|.:.:  |:..|
Yeast   438 GTALVKASRVLDEVVVDNFDQKLGVDIIRKAITRPAKQIIENAGEEGSVIIGKLIDEY--GDDFA 500

  Fly   485 -GINVRKGAITDIFAENVVQPLLV---------SISSITLATE 517
             |.:..|...||:.|..::.|..|         .::|:...||
Yeast   501 KGYDASKSEYTDMLATGIIDPFKVVRSGLVDASGVASLLATTE 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 130/563 (23%)
Cpn60_TCP1 37..529 CDD:278544 128/553 (23%)
HSP60NP_013360.1 GroEL 25..548 CDD:239460 130/563 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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