DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT4 and cct2

DIOPT Version :10

Sequence 1:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001006757.1 Gene:cct2 / 448434 XenbaseID:XB-GENE-1006535 Length:535 Species:Xenopus tropicalis


Alignment Length:537 Identity:172/537 - (32%)
Similarity:284/537 - (52%) Gaps:35/537 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AAVNIKPTAKAFKDKSKPTDVRLSNIQAAKAVSDAIRTSLGPRGMDKMIQAG--NGEVSITNDGA 68
            |.|||   .||..|:.|....|||:...|.|:.|.::::|||:||||::.:.  :..|::|||||
 Frog     7 APVNI---FKAGADEEKAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDSTVTVTNDGA 68

  Fly    69 TILKQMNVLHPAAKMLVELSRAQDVAAGDGTTSVVVIAGALLEACEKLLQKGLHPTAISDSFQRC 133
            ||||.:.:.:|||::||::|:.||...|||||||.|:|..||...|.|:.:.:||..|...:::.
 Frog    69 TILKAIGIDNPAAQVLVDMSKVQDDEVGDGTTSVTVLAAELLREAEVLVARKIHPQTIISGWRQA 133

  Fly   134 SNKAVEILKQMSTPIELDD---RETLIKSASTSLNSKVVSQQSSLLAPIAVDAVLKVTDPGKETS 195
            :..|.|.|...|.....|:   |..|:..|.|:|:||:::......:.:||:|||::...|    
 Frog   134 TQVAREALLNASVDHGNDEEKFRCDLLNIARTTLSSKLLTHHKDHFSKLAVEAVLRLKGSG---- 194

  Fly   196 VDLKNIKVISSLGGTVEDTELVDGLVFTCRSAGSNAPKRIEKAKIGLIQFCISAPKTDMDHNVI- 259
             :|:.|.||..|||::.::.|.:|.:.. :..|.|.|||||.||| ||      ..|.||.:.| 
 Frog   195 -NLEAIHVIKKLGGSLTESYLDEGFLLD-KKIGVNQPKRIENAKI-LI------ANTGMDTDKIK 250

  Fly   260 -------VSDYAAMDRVLKEERSYILNIVKQIKKSGCNVLLVQKSILRDAVSDLAQHFLDKIKCM 317
                   |...|.:..:...|:..:...|::|.|.|.|..     |.|..:.:..:........|
 Frog   251 IFGSRVRVDSTAKVAEIELAEKEKMKEKVERILKHGINCF-----INRQLIYNYPEQLFATAGVM 310

  Fly   318 VVKDVEREDIEFVCKTLHCRPIASLDHFTAENLSSADLVEEVASGTNKFVKITGIQNMGRTVSII 382
            .::..:...:|.:.........::.||.....|.:..|:|||..|.:|.:..:|:. ||...:|:
 Frog   311 AIEHADFAGVERLALVTGGEIASTFDHPELVKLGTCKLIEEVMIGEDKLIHFSGVA-MGEACTIV 374

  Fly   383 CRGSNKLVLEEAARSLHDALCVVRCLVKLRAQIVGGGAPEIEMALQLAALAQTVEGVDAYCFRAF 447
            .||:.:.:|:||.|||||||||:...||....:.|||..|:.||..:..||....|.::....:|
 Frog   375 LRGATQQILDEAERSLHDALCVLAQTVKDTRTVYGGGCSEMLMAHAVTELAIRTPGKESVAMESF 439

  Fly   448 ADALEVIPSTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGAITDIFAENVVQPLLVSISSI 512
            |.||.::|:.:|:|||.:....|::||..|::|:...|::::.|.|.::....:.:...|....:
 Frog   440 AKALRMLPTIIADNAGYDSADLVSQLRAAHSEGKSTYGLDMKNGTIGEMGELGITESFQVKRQVL 504

  Fly   513 TLATETIRSILKIDDIV 529
            ..|:|....||::|:|:
 Frog   505 LSASEAAEVILRVDNII 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 166/525 (32%)
cct2NP_001006757.1 TCP1_beta 11..527 CDD:239452 169/533 (32%)

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