DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT4 and cct3

DIOPT Version :10

Sequence 1:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_989339.1 Gene:cct3 / 394965 XenbaseID:XB-GENE-6250478 Length:548 Species:Xenopus tropicalis


Alignment Length:510 Identity:166/510 - (32%)
Similarity:289/510 - (56%) Gaps:12/510 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VRLSNIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEVSITNDGATILKQMNVLHPAAKMLVELSRA 90
            |:..||.|||.::|.|||.||||.|.||:....|.:.:||||..||:::.|.|||||.::|:||.
 Frog    21 VQSGNINAAKTIADIIRTCLGPRAMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRT 85

  Fly    91 QDVAAGDGTTSVVVIAGALLEACEKLLQKGLHPTAISDSFQRCSNKAVEILKQMSTPIELDDRET 155
            ||...|||||||:::||.:|...|:.|::.:|||.:..::::..:..|..||::|||::.:|||.
 Frog    86 QDEEVGDGTTSVIILAGEMLSVAEQFLEQQMHPTVVISAYRKALDDMVSTLKEISTPVDTNDREL 150

  Fly   156 LIKSASTSLNSKVVSQQSSLLAPIAVDAV--LKVTDPGKETSVDLKNIKVISSL-GGTVEDTELV 217
            ::|..::::|:|.:.:.:.:...||:|||  :::.:.|:: .:|:|....:..: ||.:||:.::
 Frog   151 MLKIINSAVNTKAIKRWADMACGIALDAVKTVELEENGRK-EIDIKKYAKVEKIPGGIIEDSCVL 214

  Fly   218 DGLVFTCRSAGSNAPKRIEKAKIGLIQFCISAPKTDMDHNVIVSDYAAMDRVLKEERSYILNIVK 282
            .|::...........:.|:..:|.|:...:...|.:....:.::......|:|:.|..||..:.:
 Frog   215 RGVMVNKDVTHPKMRRLIKNPRIVLLDCSLEYKKGESQTEIEITREEDFARILQMEEEYIQQVCE 279

  Fly   283 QIKKSGCNVLLVQKSILRDAVSDLAQHFLDKIKCMVVKDVEREDIEFVCKTLHCRPIASLDHFTA 347
            .|.:...:|::.:|.|     ||||||:|.|.....::.|.:.|...:.:....|..:..|....
 Frog   280 DIIRLKPDVVITEKGI-----SDLAQHYLVKANITAIRRVRKTDNNRIARACGARIGSRTDELRE 339

  Fly   348 ENL-SSADLVEEVASGTNKFVKITGIQNMGRTVSIICRGSNKLVLEEAARSLHDALCVVRCLVKL 411
            |:: :.|.|.|....|...|..||..:: .:..:|:.||::|.:|.|..|:|.||:.|.|.:|..
 Frog   340 EDVGTGAGLFEIKKIGDEYFTFITECKD-PKACTIVLRGASKEILAEVERNLQDAMQVCRNVVID 403

  Fly   412 RAQIVGGGAPEIEMALQLAALAQTVEGVDAYCFRAFADALEVIPSTLAENAGLNPIATVTELRNR 476
            ...:.||||.|:.:|..|...::|:.||:.:.:||.|.||||||.||.:|.|.:.|..:|.||.:
 Frog   404 PHLVPGGGAAEMSVAHILTEKSKTMTGVEQWPYRAVAQALEVIPRTLVQNCGASTIRVLTSLRAK 468

  Fly   477 HAQ-GEKNAGINVRKGAITDIFAENVVQPLLVSISSITLATETIRSILKIDDIVN 530
            |.| |.:..|::...|.:.|:....:.:||.|.:.:...|.||...:|:|||||:
 Frog   469 HTQEGCQTWGVDGEAGVLVDMKELGIWEPLAVKLQTYKTAVETAILLLRIDDIVS 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 166/510 (33%)
cct3NP_989339.1 chap_CCT_gamma 5..528 CDD:274085 166/510 (33%)

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