DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT4 and cct4

DIOPT Version :9

Sequence 1:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_956877.1 Gene:cct4 / 393555 ZFINID:ZDB-GENE-040426-1421 Length:533 Species:Danio rerio


Alignment Length:532 Identity:375/532 - (70%)
Similarity:450/532 - (84%) Gaps:4/532 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PKA--AAVNIKPTAKAFKDKSKPTDVRLSNIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEVSITN 65
            |:|  ||..||....|:.|:.||..:|.|||.|.|||:|||||||||:|||||||.|.|:|:|||
Zfish     2 PEAVVAASGIKNKGSAYVDRDKPAQIRYSNINAGKAVADAIRTSLGPKGMDKMIQDGKGDVTITN 66

  Fly    66 DGATILKQMNVLHPAAKMLVELSRAQDVAAGDGTTSVVVIAGALLEACEKLLQKGLHPTAISDSF 130
            |||||||||.||||||||:||||:|||:.||||||||||||||||:||.||||||:|||.||:||
Zfish    67 DGATILKQMQVLHPAAKMMVELSKAQDIEAGDGTTSVVVIAGALLDACAKLLQKGIHPTIISESF 131

  Fly   131 QRCSNKAVEILKQMSTPIELDDRETLIKSASTSLNSKVVSQQSSLLAPIAVDAVLKVTDPGKETS 195
            |:..:|.||:|..:|||:.|.|||:|:.||||||.||||||.||||||::||||:||.||...||
Zfish   132 QKAVDKGVEVLTSISTPLLLSDRESLLNSASTSLCSKVVSQNSSLLAPMSVDAVMKVIDPATATS 196

  Fly   196 VDLKNIKVISSLGGTVEDTELVDGLVFTCRSAGSNAPKRIEKAKIGLIQFCISAPKTDMDHNVIV 260
            |||::|.|:..||||::|.|||||:|.|.|.| |....|:|||||||||||:|.||||||:.::|
Zfish   197 VDLRDINVVKKLGGTIDDCELVDGMVLTQRVA-STGVSRVEKAKIGLIQFCLSPPKTDMDNQIVV 260

  Fly   261 SDYAAMDRVLKEERSYILNIVKQIKKSGCNVLLVQKSILRDAVSDLAQHFLDKIKCMVVKDVERE 325
            ||||.|||||:|||:||||:|||:||:||.|||:||||||||:||||.|||:|:|.||:||:|||
Zfish   261 SDYAQMDRVLREERAYILNLVKQVKKAGCTVLLIQKSILRDALSDLALHFLNKMKIMVIKDIERE 325

  Fly   326 DIEFVCKTLHCRPIASLDHFTAENLSSADLVEEVA-SGTNKFVKITGIQNMGRTVSIICRGSNKL 389
            :|||:|||:..:|||.:|.||.|.|.||:|||||: .|:.|.|||||..:.|:||||:.||||||
Zfish   326 EIEFICKTIGTKPIAHIDQFTPEMLGSAELVEEVSLDGSGKLVKITGCASPGKTVSIVVRGSNKL 390

  Fly   390 VLEEAARSLHDALCVVRCLVKLRAQIVGGGAPEIEMALQLAALAQTVEGVDAYCFRAFADALEVI 454
            |:|||.||:||||||:|||||.||.|.||||||||:||:||..|:::.|::|||.||:|||||||
Zfish   391 VIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLAEYARSLGGMEAYCVRAYADALEVI 455

  Fly   455 PSTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGAITDIFAENVVQPLLVSISSITLATETI 519
            |||||||||||||:|||||||||||||..||||||||.|::|..|.||||||||||::||||||:
Zfish   456 PSTLAENAGLNPISTVTELRNRHAQGETTAGINVRKGGISNILEELVVQPLLVSISALTLATETV 520

  Fly   520 RSILKIDDIVNT 531
            ||||||||:|||
Zfish   521 RSILKIDDLVNT 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 366/513 (71%)
Cpn60_TCP1 37..529 CDD:278544 355/492 (72%)
cct4NP_956877.1 TCP1_delta 20..532 CDD:239454 366/512 (71%)
Cpn60_TCP1 38..533 CDD:278544 358/496 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593763
Domainoid 1 1.000 698 1.000 Domainoid score I125
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4695
Inparanoid 1 1.050 730 1.000 Inparanoid score I603
OMA 1 1.010 - - QHG60896
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 1 1.000 - - FOG0004921
OrthoInspector 1 1.000 - - oto41709
orthoMCL 1 0.900 - - OOG6_101757
Panther 1 1.100 - - LDO PTHR11353
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1486
SonicParanoid 1 1.000 - - X3470
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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