DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT4 and CCT8

DIOPT Version :9

Sequence 1:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster


Alignment Length:556 Identity:168/556 - (30%)
Similarity:274/556 - (49%) Gaps:64/556 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PKAAAVN--IKPTAKAFKDKSKPTDVRLSNIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEVSITN 65
            |||..|:  :|..|:.:   |...:....||.|.|..:..:|::.||.||:|||.....:..:|:
  Fly     6 PKAPGVSQMLKDGARMY---SGLEEAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEKQFVTS 67

  Fly    66 DGATILKQMNVLHPAAKMLVELSRAQDVAAGDGTTSVVVIAGALLEACEKLLQKGLHPTAISDSF 130
            |..||:::::|.|||||::|..|:.||...||||..|||:||||||:.|:||:.|:....|||.:
  Fly    68 DAGTIMRELDVEHPAAKLIVMASQMQDAEVGDGTNFVVVLAGALLESAEELLRLGITTAEISDGY 132

  Fly   131 QRCSNKAVEILKQM-STPIELDDR--ETLIKSASTSLNSKVVSQQSSLLAPIAVDAVLKVTDPGK 192
            ::...||:|||..: |..|| |.|  |.:.:...||:.||...|:..|...::...|..:.|.| 
  Fly   133 EKALEKALEILPNLVSHKIE-DYRNVEKVKEVLRTSIMSKQYGQEDFLNDLVSKACVSILPDEG- 195

  Fly   193 ETSVDLKNIKVISSLGGTVEDTELVDGLVFTCRSAGSNAPKRI--------EKAKIGLIQFCISA 249
              :.::.||::...||..:..:|:|.|:||          ||.        |||||.:....:..
  Fly   196 --TFNVDNIRICKILGSGLTKSEVVRGMVF----------KRFVEGDVTYAEKAKIVIFSCPVDI 248

  Fly   250 PKTDMDHNVIVSDYAAMDRVLKEERSYILNIVKQIKKSGCNVLLVQKSILRDAVSDLAQHFLDKI 314
            .:|:....|::.....:......|.|.:.:.:|.|..:|..|:     :....|.|:|.|||:|.
  Fly   249 IQTETKGTVLIKSADELLSFSSGEESLLESQIKAIADAGVKVV-----VAGGKVGDMALHFLNKY 308

  Fly   315 KCMVVKDVEREDIEFVCKTLHCRPIASLDHFTAENLSSAD--LVEEVASGTNKFVKITGIQNMG- 376
            ..|.|:...:.|:..:.::::...:..:...:.|.|...|  .:||:...|     |...:|.| 
  Fly   309 GLMAVRLNSKFDLRRLSRSVNATVLPRITTPSQEELGYCDKVCIEELGDTT-----IVAFRNEGK 368

  Fly   377 --RTVSIICRGSNKLVLEEAARSLHDALCVVRCLVKLRAQIVGGGAPEIEMALQLAALAQTVEGV 439
              |..:::.||:....:::..|:|.||:...:||.:....:.|.||.|||:|.||:|.|.|:.|:
  Fly   369 DSRIATVVIRGATDNFMDDIERALDDAINNFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGL 433

  Fly   440 DAYCFRAFADALEVIPSTLAENAGLNPIATVTELRNRH-----------AQGEKNAGINVRKGAI 493
            |.|..|.||:||||.|..||||:|:|....|.:|...|           .:.||.:.|:..|..:
  Fly   434 DQYAVRKFANALEVFPKALAENSGINGTEIVNQLYLAHNNEAGKTIGFDIEAEKASTIDTTKAKL 498

  Fly   494 TDIFAENVVQPLLVSISSITLATETIRSILKIDDIV 529
            .|::..        ....:..|.....:|||:|.|:
  Fly   499 FDLYQS--------KFWGLKYAVGAAATILKVDQII 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 162/539 (30%)
Cpn60_TCP1 37..529 CDD:278544 156/518 (30%)
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 162/542 (30%)
Cpn60_TCP1 40..529 CDD:278544 157/519 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453406
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11353
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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