DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT4 and HSPD1

DIOPT Version :9

Sequence 1:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_002147.2 Gene:HSPD1 / 3329 HGNCID:5261 Length:573 Species:Homo sapiens


Alignment Length:560 Identity:117/560 - (20%)
Similarity:240/560 - (42%) Gaps:86/560 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KDKSKPTDVRLSNIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEVSITNDGATILKQMNV----LH 78
            ||.....|.|...:|....::||:..::||:|...:|:...|...:|.||.|:.|.:::    .:
Human    28 KDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKN 92

  Fly    79 PAAKMLVELSRAQDVAAGDGTTSVVVIAGALLEACEKLLQKGLHPTAISDSFQRCSNKAVEILKQ 143
            ..||::.:::...:..||||||:..|:|.::.:...:.:.||.:|..|........:..:..||:
Human    93 IGAKLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKK 157

  Fly   144 MSTPIELDDRETLIKSASTSLNSKVVSQQSSLLAPIAVDAVLKVTDPGKETSVDLKNIKVISSLG 208
            .|.|:...  |.:.:.|:.|.|.      ...:..|..||:.||   |::..:.:|:.|.::   
Human   158 QSKPVTTP--EEIAQVATISANG------DKEIGNIISDAMKKV---GRKGVITVKDGKTLN--- 208

  Fly   209 GTVEDTELVDGL---------VFTCRSAG-----SNAPKRIEKAKIGLIQFCISAPKTDMDHN-- 257
               ::.|:::|:         .|...|.|     .:|...:.:.||..||..:.|.:....|.  
Human   209 ---DELEIIEGMKFDRGYISPYFINTSKGQKCEFQDAYVLLSEKKISSIQSIVPALEIANAHRKP 270

  Fly   258 -VIVS---DYAAMDRVLKEERSYILNIVKQIKKSGCNVLLV--------QKSILRD-AVSDLAQH 309
             ||::   |..|:.       :.:||.:    |.|..|:.|        :|:.|:| |::.....
Human   271 LVIIAEDVDGEALS-------TLVLNRL----KVGLQVVAVKAPGFGDNRKNQLKDMAIATGGAV 324

  Fly   310 FLDKIKCMVVKDVEREDIEFVCKTLHCRPIASL-----DHFTAENLSSADLVEEVASGTNKFVKI 369
            |.::...:.::||:..|:..|.:.:..:..|.|     |....|. ...:::|::...|:::.|.
Human   325 FGEEGLTLNLEDVQPHDLGKVGEVIVTKDDAMLLKGKGDKAQIEK-RIQEIIEQLDVTTSEYEKE 388

  Fly   370 TGIQNMGRT---VSII-CRGSNKLVLEEAARSLHDALCVVRCLVKLRAQIVGGGAPEIEMALQLA 430
            ...:.:.:.   |::: ..|::.:.:.|....:.|||...|..|: ...::|||...:.....|.
Human   389 KLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVE-EGIVLGGGCALLRCIPALD 452

  Fly   431 ALAQTVE----GVDAYCFRAFADALEVIPSTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKG 491
            :|....|    |::     .....|::...|:|:|||:.....|.::    .|.....|.:...|
Human   453 SLTPANEDQKIGIE-----IIKRTLKIPAMTIAKNAGVEGSLIVEKI----MQSSSEVGYDAMAG 508

  Fly   492 AITDIFAENVVQPLLVSISSITLATETIRSILKIDDIVNT 531
            ...::..:.::.|..| :.:..|....:.|:|...::|.|
Human   509 DFVNMVEKGIIDPTKV-VRTALLDAAGVASLLTTAEVVVT 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 116/558 (21%)
Cpn60_TCP1 37..529 CDD:278544 110/537 (20%)
HSPD1NP_002147.2 GroEL 28..548 CDD:239460 117/560 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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