DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT4 and cct5

DIOPT Version :9

Sequence 1:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_997778.1 Gene:cct5 / 322258 ZFINID:ZDB-GENE-030131-977 Length:541 Species:Danio rerio


Alignment Length:524 Identity:208/524 - (39%)
Similarity:316/524 - (60%) Gaps:23/524 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KDKSKPT-----DVRLSNIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEVSITNDGATILKQMNVL 77
            ||:.|.:     :...|:|.|||||::.:||||||.|:|||:...:|||::||||||||..|:|.
Zfish    20 KDQDKKSRLTGLEALKSHILAAKAVANTLRTSLGPNGLDKMMVDKDGEVTVTNDGATILSMMDVD 84

  Fly    78 HPAAKMLVELSRAQDVAAGDGTTSVVVIAGALLEACEKLLQKGLHPTAISDSFQRCSNKAVEILK 142
            |..||::||||::||...|||||.|||:||||||..|:||.:|:||..|:|.:.:.:..|:|.|.
Zfish    85 HQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEQAEQLLDRGIHPIRIADGYDQAAKIAIEQLD 149

  Fly   143 QM--STPIELDDRETLIKSASTSLNSKVVSQQSSLLAPIAVDAVLKVTDPGKETSVDLKNIKVIS 205
            ::  |.|::.::.|:|:::|.|:|.|||:::....:|.|||:|:|.|.|..:: .||.:.|||..
Zfish   150 KIGDSFPVDPNNTESLVQTAMTTLGSKVINRCHRQMAEIAVNAILTVADMERK-DVDFELIKVEG 213

  Fly   206 SLGGTVEDTELVDGLVFTCRSAGSNAPKRIEKAKIGLIQFCISAPKTDMDHNV---IVSDYAAMD 267
            .:||.:|||:|:.|::.....:....||.::..||.::......||....|.:   .|.||.|:.
Zfish   214 KVGGKLEDTQLIKGVIVDKEFSHPQMPKVLKDTKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQ 278

  Fly   268 RVLKEERSYILNIVKQIKKSGCNVLLVQKSILRDAVSDLAQHFLDKIKCMVVKDVEREDIEFVCK 332
               |.|:.....:::|:|::|.|:.:.|...     .|.|.|.|.:.:...::.|...:||.:..
Zfish   279 ---KYEKDKFQEMIRQVKENGANLAICQWGF-----DDEANHLLLQNELPAIRWVGGPEIELIAI 335

  Fly   333 TLHCRPIASLDHFTAENLSSADLVEEVASGTNK--FVKITGIQNMGRTVSIICRGSNKLVLEEAA 395
            ....|.:......|.|.|.:|.||:|:..||.|  .:.|...:| .|.|:|..||.||:::|||.
Zfish   336 ATGGRIVPRFCELTPEKLGTAGLVKEICFGTTKDRMLVIEECKN-SRAVTIFIRGGNKMIIEEAK 399

  Fly   396 RSLHDALCVVRCLVKLRAQIVGGGAPEIEMALQLAALAQTVEGVDAYCFRAFADALEVIPSTLAE 460
            |:|||||||:|.||:....:.||||.||..||.:...|.....::.|..|||||||||||..|||
Zfish   400 RALHDALCVIRNLVRDNRIVYGGGASEIACALAVNEAADKCPSLEQYAMRAFADALEVIPMALAE 464

  Fly   461 NAGLNPIATVTELRNRHAQGEKNA-GINVRKGAITDIFAENVVQPLLVSISSITLATETIRSILK 524
            |:|||||.|:||:|.|..:...:| ||:....:..|:..::|::.|:.....|:|||:.::.|||
Zfish   465 NSGLNPIQTMTEVRARQVKENNSALGIDCLHLSTNDMKQQHVIETLIGKKQQISLATQVVKMILK 529

  Fly   525 IDDI 528
            ||||
Zfish   530 IDDI 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 208/524 (40%)
Cpn60_TCP1 37..529 CDD:278544 199/500 (40%)
cct5NP_997778.1 TCP1_epsilon 10..535 CDD:239455 208/524 (40%)
Cpn60_TCP1 44..533 CDD:278544 197/498 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60896
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.830

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