DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT4 and CCT2

DIOPT Version :10

Sequence 1:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster


Alignment Length:113 Identity:24/113 - (21%)
Similarity:39/113 - (34%) Gaps:44/113 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 AAEVARYDNYRLY----------RVT-------------------PHSEAQLTQASDSLIFLETA 63
            |.||...|||..:          |.|                   |::.....:.||   |....
  Fly    91 AFEVQTTDNYSYFIDVVHGIIPPRQTSVNAAIRMPNSVCIQVYHRPYNAYSAERQSD---FFNRP 152

  Fly    64 RKLGDRFDIVVAPHKLADFTETLESDYIPHELIEQNVQRAFDEERVRL 111
            ||  |:..|::||    ...:|...:.|.|.      :|::::.|:.|
  Fly   153 RK--DKMSILLAP----QICQTFSPEAIFHN------ERSYEKLRIML 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 24/113 (21%)
CCT2NP_572524.1 TCP1_beta 10..527 CDD:239452 24/113 (21%)

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