DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT4 and cct7

DIOPT Version :9

Sequence 1:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_775355.1 Gene:cct7 / 192324 ZFINID:ZDB-GENE-020419-7 Length:547 Species:Danio rerio


Alignment Length:521 Identity:180/521 - (34%)
Similarity:288/521 - (55%) Gaps:24/521 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DKSKPTDVRLSNIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEVSITNDGATILKQMNVLHPAAKM 83
            |.|:.....:|||.|.:.|::|:||:||||||||::....|:.:|:||||||||.::|:|||||.
Zfish    14 DTSQGVPQLVSNINACQVVAEAVRTTLGPRGMDKLVVDNRGKATISNDGATILKLLDVVHPAAKT 78

  Fly    84 LVELSRAQDVAAGDGTTSVVVIAGALLEACEKLLQKGLHPTAISDSFQRCSNKAVEILKQMSTPI 148
            ||:::|:||...|||||||.::|...|:..:..:::||||..|..:|:..:..||:.:|:::..|
Zfish    79 LVDIARSQDAEVGDGTTSVTLLAAEFLKQLKPYVEEGLHPQTIIRAFRIATQLAVKKIKEIAVTI 143

  Fly   149 ELDD----RETLIKSASTSLNSKVVSQQSSLLAPIAVDAVLKVTDPGKETSVDLKNIKVISSLGG 209
            :.||    |..|.|.|:|:||||:::.|....:.:.||||:.:.|     .:.||.|.|....||
Zfish   144 KKDDKQEQRRLLEKCAATALNSKLIAGQKDFFSKMVVDAVMMLDD-----LLPLKMIGVKKVQGG 203

  Fly   210 TVEDTELVDGLVF--TCRSAG-SNAPKRIEKAKIGL--IQFCISAPKTDMDHNV-IVSDYAAMDR 268
            .:|:::||.|:.|  |...|| ...|||....||.|  |:..:.|.|.:.:..| .:.||.|   
Zfish   204 ALEESQLVAGVAFKKTFSYAGFEMQPKRYMNPKIALLNIELELKAEKDNAEVRVNSMEDYQA--- 265

  Fly   269 VLKEERSYILNIVKQIKKSGCNVLLVQKSILRDAVSDLAQHFLDKIKCMVVKDVEREDIEFVCKT 333
            ::..|.:.:.:.:::|.|||..|:|.:..|     .|:|..:...........|..|:::.....
Zfish   266 IVDAEWNILYDKLEKIHKSGAKVVLSKLPI-----GDVATQYFAYRNLFCAARVVEENLKRTMMA 325

  Fly   334 LHCRPIASLDHFTAENLSSADLVEEVASGTNKFVKITGIQNMGRTVSIICRGSNKLVLEEAARSL 398
            .......|:...|.:.|...:|.|||..|..::....|... .:|.:||.||..:..:||..|||
Zfish   326 CGGSIQTSVGSLTDDVLGQCELFEEVQVGGERYNFFKGCPK-AKTCTIILRGGAEQFMEETDRSL 389

  Fly   399 HDALCVVRCLVKLRAQIVGGGAPEIEMALQLAALAQTVEGVDAYCFRAFADALEVIPSTLAENAG 463
            |||:.:||..:|..:.:.||||.|:|::..|...::|:.|.......|:|.|||:||..|.:|||
Zfish   390 HDAIMIVRRAIKNDSIVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAG 454

  Fly   464 LNPIATVTELRNRHAQGEKNAGINVRKGAITDIFAENVVQPLLVSISSITLATETIRSILKIDDI 528
            .:....:.:||.:||||....|::|....|.|.|...|.:|.:|.|:::|.|:|....||.:|:.
Zfish   455 FDATNILNKLRAKHAQGGMWYGVDVNNEDIADNFQACVWEPSIVRINALTAASEAACLILSVDET 519

  Fly   529 V 529
            :
Zfish   520 I 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 180/521 (35%)
Cpn60_TCP1 37..529 CDD:278544 174/501 (35%)
cct7NP_775355.1 chap_CCT_eta 4..525 CDD:274086 180/521 (35%)
TCP1_eta 5..525 CDD:239456 180/521 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60896
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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