DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT4 and hspd1

DIOPT Version :9

Sequence 1:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001096355.1 Gene:hspd1 / 100124945 XenbaseID:XB-GENE-980059 Length:576 Species:Xenopus tropicalis


Alignment Length:600 Identity:120/600 - (20%)
Similarity:236/600 - (39%) Gaps:136/600 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PKAAAVNIKPTAKAFKDKSKPTDVRLSNIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEVSITNDG 67
            |.:.|:::..:.:..||.....|.|...:|....::||:..::||:|...:|:...|...:|.||
 Frog    13 PASRALSLSLSRQYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDG 77

  Fly    68 ATILKQMNV----LHPAAKMLVELSRAQDVAAGDGTTSVVVIAGALLEACEKLLQKGLHPTAISD 128
            .|:.|.:::    .:..||::.:::...:..||||||:..|:|.::.:...:.:.||.:|..|..
 Frog    78 VTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRR 142

  Fly   129 SFQRCSNKAVEILKQMSTPIELDDRETLIKSASTSLN-----SKVVSQQSSLLAPIAVDAVLKVT 188
            ......:..::.||..|.|:...  |.:.:.|:.|.|     .|::|           ||:.:| 
 Frog   143 GVMMAVDAVIKELKNQSKPVTTP--EEIAQVATISANGDQEIGKIIS-----------DAMKRV- 193

  Fly   189 DPGKETSVDLKNIKVISSLGGTVEDTELVDGLVFTCRSAGSNAPKRIEKA--------------- 238
              |:...:.:|:.|.:.      ::.|:::|:.|   ..|..:|..|..|               
 Frog   194 --GRRGVITVKDGKTLH------DELEIIEGMKF---DRGYISPYFINTAKGQKCEFQDAYLLLS 247

  Fly   239 --KIGLIQFCISAPKTDMDHN---VIVS---DYAAMDRVLKEERSYILNIVKQIKKSGCNVLLV- 294
              ||..:|..:.|.:....|.   ||::   |..|:.       :.:||.:    |.|..|:.| 
 Frog   248 EKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALS-------TLVLNRL----KVGLQVVAVK 301

  Fly   295 -------QKSILRDA-----------------VSDLAQHFLDKI-KCMVVKD--------VERED 326
                   :|:.|:|.                 :.|:..|...|: :.:|.||        .::..
 Frog   302 APGFGDNRKNQLKDMAISSGGVVFGEEGLTLNIEDIQPHDFGKVGEVIVTKDDTMLLKGKGDKAQ 366

  Fly   327 IEFVCKTLHCRPIASLDHFTAENLSSADLVEEVASGTNKFVKITGIQNMGRTVSII-CRGSNKLV 390
            ||...:.:|            |.|.|.:...|......:..|::.      .|::| ..|::.:.
 Frog   367 IEKRIQEIH------------EQLESTNSEYEKEKLNERLAKLSD------GVAVIKVGGTSDVE 413

  Fly   391 LEEAARSLHDALCVVRCLVKLRAQIVGGGAPEIEMALQLAALAQTVE----GVDAYCFRAFADAL 451
            :.|....:.|||...|..|: ...::|||...:.....|.||....|    |::     .....|
 Frog   414 VNEKKDRVTDALNATRAAVE-EGIVLGGGCALLRCIPALEALNPANEDQRVGIE-----IIRRTL 472

  Fly   452 EVIPSTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGAITDIFAENVVQPLLVSISSITLAT 516
            ::...|:|:|||:.....|.::    .|.....|.:.......::..:.::.|..| :.:..:..
 Frog   473 KIPAMTIAKNAGVEGSLVVEKI----IQSPVEIGYDAMHAEFVNLVEKGIIDPTKV-VRTALMDA 532

  Fly   517 ETIRSILKIDDIVNT 531
            ..:.|:|...:.|.|
 Frog   533 AGVASLLTTAEAVVT 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 117/583 (20%)
Cpn60_TCP1 37..529 CDD:278544 111/562 (20%)
hspd1NP_001096355.1 GroEL 28..548 CDD:239460 117/584 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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