Protein Alignment pdm2 and pou4f1

DIOPT Version :9

• Sequence 1: NP_001285877.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: NP_001299795.1
• Gene: pou4f1 / 58057
• ZFINID: ZDB-GENE-000523-2
• Length: 366
• Species: Danio rerio
• Alignment Length: 383
• Identity: 121/383 - (31%)
• Similarity: 168/383 - (43%)
• Gaps: 86/383 - (22%)

  Fly   523 SVNPPQPVAFAPEEMHQAL----QLQLHSYIEMVRQLAPEAFPNPNLATQFLLQNSLQALAQFQA 583
            |:|..|| .||   ||.:|    ...|||..|.:|:   .....|.|.:..........||:.:|
Zfish     3 SMNSKQP-HFA---MHPSLPEHKYTTLHSSSEAIRR---ACLQTPQLQSNIFASLDETLLARAEA 60

  Fly   584 LQQMK---QQQREDPLPSYSTPLAKSPLRSPSLSPVP-------RHSKSQQRTPPNSMTANSLGM 638
            |..:.   .|.:..|....:|....:.:...|.|.||       .|....|...|..:..:....
Zfish    61 LAAVDIAVSQGKSHPFKPDATYHTMNTVPCSSTSTVPLAHHHHHHHHHHHQNLEPADLMEHITSP 125

  Fly   639 SSAVMTPNTPSMQQQP----------QLQQSTPKPTS---GLTVASAMAKLEQSP---------- 680
            |.|:|    ||..:..          .|..::..|.|   |||..|..|....||
Zfish   126 SLALM----PSAHEGAGGGGGGGGGGGLISTSAHPHSHMHGLTHLSHQAMNMNSPLSHHGLLPGH 186

  Fly   681 --------------------EETTDLEELEQFAKTFKQRRIKLGFTQGDVG--LAMGKLYG-NDF 722
                                :..||..|||.||:.|||||||||.||.|||  ||..|:.| ...
Zfish   187 HGGAHQGAPGLVNNGLPSINDSDTDPRELEAFAERFKQRRIKLGVTQADVGGALANLKIPGVGSL 251

  Fly   723 SQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESILG-RR 786
            ||:||.|||:|.||..||..|||:||.|||:|:....:.              .|.|:...| .:
Zfish   252 SQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREK--------------MSKPDIFNGSEK 302

  Fly   787 RKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRI 844
            ::|||||....:.:||..|.:..:|:||:|:.::|:|::.|.|:||||||:|||:||:
Zfish   303 KRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRL 360

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm2	NP_001285877.1	POU	691..755	CDD:197673	40/66 (61%)
		Homeobox	789..842	CDD:278475	25/52 (48%)
pou4f1	NP_001299795.1	POU	207..284	CDD:197673	45/76 (59%)
		Homeobox	305..358	CDD:278475	25/52 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810