Protein Alignment pdm2 and pou4f4

DIOPT Version :9

• Sequence 1: NP_001285877.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: NP_001073527.1
• Gene: pou4f4 / 572084
• ZFINID: ZDB-GENE-061215-70
• Length: 343
• Species: Danio rerio
• Alignment Length: 365
• Identity: 117/365 - (32%)
• Similarity: 168/365 - (46%)
• Gaps: 73/365 - (20%)

  Fly   523 SVNPPQPVAFAPEEMHQALQLQLHSYIEMVRQLAPEAFPNPNLA-------TQFLLQNSLQALAQ 580
            |:|..||.:..| .:|:.....|||..|.:|:   ...|.|:|.       .:.|||.: :|||.
Zfish     3 SMNSKQPFSMHP-ILHEPKYTPLHSSSEAIRR---ACLPTPSLQGNIFAGFDETLLQRA-EALAA 62

  Fly   581 FQALQQMKQQQREDPLPSY----------STPLAKS-PLRSPSLSPVPRHSKSQQRTP------- 627
            ...:.|.....:.|  .:|          .||.:.| .|..||:.....|....|.|.
Zfish    63 VDIVAQKSHPFKPD--ATYHTMTTMTSMTCTPTSSSGHLHHPSVLTSHHHHPHHQPTQGLEGDLL 125

  Fly   628 -----------PNSMTANSLGMSSAVMTPNTPSMQQQPQLQQSTPKPTSGLTVASAMAKLEQSPE 681
                       |.|...::.....:.|:.........||.....|   .||   .:.|.|....:
Zfish   126 DHLPGISIGGMPGSDVCSTASHPHSHMSAINHMQHHHPQSMNMHP---HGL---GSHASLGGVGD 184

  Fly   682 ETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKL 743
            ...|..|||.||:.|||||||||.||.|||.|:.  |:.| ...||:||.|||:|.||..||..|
Zfish   185 SEPDPRELESFAERFKQRRIKLGVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVAL 249

  Fly   744 KPLLQKWLEDAD----STVAKSGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKA 804
            ||:|:.|||:|:    ..:||.  .:||               .|.:::|||||....:.:||..
Zfish   250 KPILEAWLEEAERAQREKMAKP--EIFN---------------GGDKKRKRTSIAAPEKRSLEAY 297

  Fly   805 FLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRI 844
            |.:..:|:||:|:.::|:|::.|.|:||||||:|||:||:
Zfish   298 FAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 337

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm2	NP_001285877.1	POU	691..755	CDD:197673	38/66 (58%)
		Homeobox	789..842	CDD:278475	25/52 (48%)
pou4f4	NP_001073527.1	POU	184..261	CDD:197673	42/76 (55%)
		Homeobox	282..335	CDD:278475	25/52 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810