Protein Alignment pdm2 and pou2f1

DIOPT Version :10

• Sequence 1: NP_723763.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: XP_012812406.1
• Gene: pou2f1 / 549091
• XenbaseID: XB-GENE-853992
• Length: 764
• Species: Xenopus tropicalis
• Alignment Length: 535
• Identity: 196/535 - (36%)
• Similarity: 258/535 - (48%)
• Gaps: 153/535 - (28%)

  Fly   399 HQQPPVGEVLPPNSTSFST---IVDPPKEPSIYEQPA--PNGRHCRPANKVMRHMSNSP------ 452
            ||....|..|...:.|.:.   ..:.|.||:...||:  |:.:...|..::|  ::..|
 Frog    74 HQVQLAGTSLQAAAQSLNVQTKFKEEPGEPTQAVQPSQQPSLQAAIPQTQLM--VAGGPITGLTL 136

  Fly   453 TPPSPLRSLSDCGKSFEEEELELGENCEMPQNLSSKRQARELDSELENEVLDLAPPPKRLAEEQE 517
            ||                         ...|.|..:.||:.|.:.:::.           |.:|.
 Frog   137 TP-------------------------AQQQLLLQQAQAQLLAAAVQHS-----------ASQQH 165

  Fly   518 EEKVASVNP-----------PQPVAFAPEEMHQALQLQ-----LHSYIEMVRQLAPEAFPNPNL- 565
            ....|:::.           .||:..| :::.|..|||     |..::.:        .|..||
 Frog   166 SAAGATISASAATPMTQIPLSQPIQIA-QDLQQLQQLQQQNLNLQQFVLV--------HPTTNLP 221

  Fly   566 ATQFLLQNS---LQALAQFQ-ALQQMKQQQREDPLPSYSTPLAKSPLRSPSLSPVPRHSKSQQRT 626
            ..||::..:   .|.|.|.| .|.|:.||.:.:.|.|           .||::     ..||..|
 Frog   222 PAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQS-----------QPSIT-----LTSQPAT 270

  Fly   627 PPNSMTANSLGMSSAVMTPNTPSMQQQPQLQQSTPKPTSGLTVASAMAKLEQSPEETTDLEELEQ 691
            |..::.|             || :||.|| .|:|||...           ..|.||.:|||||||
 Frog   271 PTRTIAA-------------TP-VQQLPQ-SQTTPKRID-----------TPSLEEPSDLEELEQ 309

  Fly   692 FAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADS 756
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||.||
 Frog   310 FAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDA-- 372

  Fly   757 TVAKSGGGVFNINTMTSTLSSTPESI----------LGRRRKKRTSIETTVRTTLEKAFLMNCKP 811
                      .:..:||..|.:.:|:          |.|||||||||||.:|..|||:||.|.||
 Frog   373 ----------VLENITSDSSLSNQSVLNSPGHGMEGLNRRRKKRTSIETNIRVALEKSFLENQKP 427

  Fly   812 TSEEISQLSERLNMDKEVIRVWFCNRRQKEKRINPSLDLDSPTGTPLSSHAFGYPPQALNMSHMQ 876
            |||||:.::::|||:||||||||||||||||||||          |.|..:...|.::|..|...
 Frog   428 TSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINP----------PSSGGSSSSPIKSLFSSANP 482

  Fly   877 MEGGSGSFCGSSISS 891
            :...:.|...||.::
 Frog   483 LVATTPSLVTSSTAT 497

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm2	NP_723763.1	PHA03247	<375..675	CDD:223021	64/307 (21%)
		POU	691..755	CDD:197673	61/63 (97%)
		Homeodomain	787..843	CDD:459649	41/55 (75%)
pou2f1	XP_012812406.1	POU	299..372	CDD:197673	68/72 (94%)
		Homeodomain	403..459	CDD:459649	41/55 (75%)
		POU2F1_C	473..750	CDD:437368	5/25 (20%)