Protein Alignment pdm2 and pou1f1

DIOPT Version :10

• Sequence 1: NP_723763.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: NP_998016.1
• Gene: pou1f1 / 405777
• ZFINID: ZDB-GENE-040630-7
• Length: 350
• Species: Danio rerio
• Alignment Length: 379
• Identity: 126/379 - (33%)
• Similarity: 178/379 - (46%)
• Gaps: 99/379 - (26%)

  Fly   481 MPQNLSSKRQARELD-SELENEVLDL--APPPKRLAEEQEEEKVASVNPPQPVAFAPEEMHQALQ 542
            :|...||||....|. |.|.|....|  ..||...:.:|....:          .|.:||
Zfish    48 LPLVQSSKRSHMHLSTSALGNASASLHYPMPPCHYSNQQTTYGM----------MAAQEM----- 97

  Fly   543 LQLHSYIEMVRQLAPEAFPNPNLATQFLLQNSLQ-ALAQFQALQQMKQQQREDPLPSYSTPLAKS 606
              |.:.|...|.|...:.|:.|:...   .|||| |||
Zfish    98 --LSASISQTRILQTCSVPHANMVNG---ANSLQGALA--------------------------- 130

  Fly   607 PLRSPSLSPVPRHSKSQQRTPPNSMTANSLGMSSAVMTPNTPSMQQQPQLQQS--TPKPTSGLTV 669
                |.|...|.||.:              |.|.|:.....|       |.|:  |.:|..| .:
Zfish   131 ----PRLYKFPEHSLA--------------GGSCALSHGFAP-------LPQTLLTDEPILG-DI 169

  Fly   670 ASAMAKLEQSPEETTDLE-----ELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISR 729
            ...:.:..::.:||.|::     |||:||..||.||||||:||.:||.|:..::|::||||||.|
Zfish   170 KQELRRKSRTLDETPDMDSPQIRELEKFANDFKLRRIKLGYTQTNVGEALAAVHGSEFSQTTICR 234

  Fly   730 FEALNLSFKNMCKLKPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESILGRRRKKRTSIE 794
            ||.|.|||||.||||.:|.||||:|:     ..|.:||          ....:..|:||:||:|.
Zfish   235 FENLQLSFKNACKLKSILAKWLEEAE-----QAGALFN----------EKMGLHERKRKRRTTIS 284

  Fly   795 TTVRTTLEKAFLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRINPSL 848
            ...:..||::|:...||:|:||.:::|.|:::|||:|||||||||:|||:..||
Zfish   285 LGAKEALERSFVEKSKPSSQEIVRMAEGLHLEKEVVRVWFCNRRQREKRVKTSL 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm2	NP_723763.1	PHA03247	<375..675	CDD:223021	43/199 (22%)
		POU	691..755	CDD:197673	40/63 (63%)
		Homeodomain	787..843	CDD:459649	28/55 (51%)
pou1f1	NP_998016.1	POU	186..260	CDD:197673	43/73 (59%)
		Homeodomain	277..333	CDD:459649	28/55 (51%)