Protein Alignment pdm2 and pou2f1b

DIOPT Version :9

• Sequence 1: NP_001285877.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: XP_005167869.1
• Gene: pou2f1b / 323702
• ZFINID: ZDB-GENE-030131-2422
• Length: 702
• Species: Danio rerio
• Alignment Length: 462
• Identity: 179/462 - (38%)
• Similarity: 228/462 - (49%)
• Gaps: 111/462 - (24%)

  Fly   451 SPTPPSPLRSLSDCGKSFEEEELELG-ENCEMPQN-LSSKRQARELDSELEN-------EVLDLA 506
            |..|.|.:.:.|:..|.    .:|.| ||.....| |..:||..:..|.:.|       :.|.|.
Zfish    12 SSGPDSRMSNPSETSKC----AMESGDENTGAQTNGLDFQRQTVQTTSAITNAHAQALLQQLTLT 72

  Fly   507 PPPKRLAEEQEEEKV---------------------ASVNPP-------QPVAFAP-----EEMH 538
            |..::|..:|.:.::                     ||...|       ||:...|     ::..
Zfish    73 PAQQQLLLQQAQAQLLAAAVQHSAGQQSSTTGASISASAATPITQIPLSQPIQITPQLLQQQQQQ 137

  Fly   539 QALQLQLHSYIEMVRQLAPEAFPNPNLATQFLLQNSLQALAQFQALQQMKQQQREDPLPSYSTPL 603
            |.|.||....::....:|.:..|     .||::..:.|........|.:..|     ||.....|
Zfish   138 QNLNLQQFVLVQPGHPIATQLQP-----AQFIISQTPQGQQSLLQAQNLLTQ-----LPQSQANL 192

  Fly   604 AKSPLRSPSLSPVPRHSKSQQRTPPNSMTANSLGMSSAVMTPNTPSMQQQPQLQQSTPKPTSGLT 668
            .::   .||::     ..:|..||..::.|..:  .|...|..||.....|.|
Zfish   193 LQT---QPSIT-----LATQPATPTRTIAATPI--QSLAHTQTTPKHMDTPSL------------ 235

  Fly   669 VASAMAKLEQSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEAL 733
                        ||.:|||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   236 ------------EEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEAL 288

  Fly   734 NLSFKNMCKLKPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESI---------LGRRRKK 789
            ||||||||||||||:|||.||          |...|..:....|:|.|:         |.|||||
Zfish   289 NLSFKNMCKLKPLLEKWLNDA----------VCAENQTSDQALSSPSSLGSPGLGMEGLNRRRKK 343

  Fly   790 RTSIETTVRTTLEKAFL-MNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRINPSLDLDSP 853
            ||||||.:|..|||:|| .|.|||||||:.::::|||:||||||||||||||||||||. :..|.
Zfish   344 RTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPP-NNGSA 407

  Fly   854 TGTPLSS 860
            ..||:.:
Zfish   408 ASTPIKA 414

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm2	NP_001285877.1	POU	691..755	CDD:197673	61/63 (97%)
		Homeobox	789..842	CDD:278475	38/53 (72%)
pou2f1b	XP_005167869.1	TFIIA	59..>226	CDD:281188	34/186 (18%)
		POU	236..309	CDD:197673	68/72 (94%)
		Homeobox	343..397	CDD:278475	38/53 (72%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	141	1.000	Domainoid score	I4662
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		mtm6509
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11636
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	4.100