Protein Alignment pdm2 and Pou3f2

DIOPT Version :9

• Sequence 1: NP_001285877.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: NP_742082.2
• Gene: Pou3f2 / 29588
• RGDID: 61946
• Length: 445
• Species: Rattus norvegicus
• Alignment Length: 347
• Identity: 141/347 - (40%)
• Similarity: 173/347 - (49%)
• Gaps: 84/347 - (24%)

  Fly   571 LQNSLQALAQFQALQQMKQQQREDPLPSYSTPLAKSPLRSPSL-------SPVP---RHSKSQQR 625
            ||...|...|.|..||.:|||::.          :...|.|.|       .|.|   |.:.:...
  Rat   124 LQQQHQQQQQQQQQQQQQQQQQQQ----------QQQQRPPHLVHHAANHHPGPGAWRSAAAAAH 178

  Fly   626 TPPN-------------SMTANSL-------------GMSSAVMTP----NTPSMQQQPQLQQST 660
            .||:             |.|.|.:             |:..|...|    :.|.....|..|...
  Rat   179 LPPSMGASNGGLLYSQPSFTVNGMLGAGGQPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQQPPP 243

  Fly   661 PKPTSGLTVASAMAKLEQSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQT 725
            |.|..|............|.|:|...::||||||.||||||||||||.|||||:|.||||.||||
  Rat   244 PPPPQGPPGHPGAHHDPHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQT 308

  Fly   726 TISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESI-----LGR 785
            ||.|||||.|||||||||||||.||||:|||:                  |.:|.||     .||
  Rat   309 TICRFEALQLSFKNMCKLKPLLNKWLEEADSS------------------SGSPTSIDKIAAQGR 355

  Fly   786 RRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRINPSLDL 850
            :||||||||.:|:..||..||...||:::||:.|::.|.::|||:|||||||||||||:.|
  Rat   356 KRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTP---- 416

  Fly   851 DSPTGT-PLSSHAFG----YPP 867
              |.|| |.:...:|    .||
  Rat   417 --PGGTLPGAEDVYGGSRDTPP 436

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm2	NP_001285877.1	POU	691..755	CDD:197673	54/63 (86%)
		Homeobox	789..842	CDD:278475	30/52 (58%)
Pou3f2	NP_742082.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	63..173		16/58 (28%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	203..269		12/65 (18%)
		POU	264..338	CDD:197673	58/73 (79%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	336..361		12/42 (29%)
		Homeobox	359..412	CDD:278475	30/52 (58%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	411..445		11/32 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810