Protein Alignment pdm2 and Pou4f3

DIOPT Version :10

• Sequence 1: NP_723763.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: NP_620395.2
• Gene: Pou4f3 / 18998
• MGIID: 102523
• Length: 338
• Species: Mus musculus
• Alignment Length: 365
• Identity: 119/365 - (32%)
• Similarity: 171/365 - (46%)
• Gaps: 72/365 - (19%)

  Fly   523 SVNPPQPVAFAPEEMHQALQ----LQLHSYIEMVRQLAPEAFPNPNLATQFL--LQNSLQALAQF 581
            ::|..||..     ||..||    ..|||..|.:|::   ..|.|.|.....  ...||.|.|:.
Mouse     3 AMNAKQPFG-----MHPVLQEPKFSSLHSGSEAMRRV---CLPAPQLQGNIFGSFDESLLARAEA 59

  Fly   582 QALQQMKQQQREDPLPSYSTPLAKSPLRSPSLSPV------------PRHSKSQ-------QRTP 627
            .|...:....:..|....:|....|.:...|.||.            |.|:..|       :...
Mouse    60 LAAVDIVSHGKNHPFKPDATYHTMSSVPCTSTSPTVPISHPAALTSHPHHAVHQGLEGDLLEHIS 124

  Fly   628 PNSMTANSLGMSSAVMTPNTPSMQQQP-------QLQQSTPKPTSGLTVASAMAKLEQSPEETTD 685
            | :::.:.||.....:.|    .|..|       .|.|:     .|::...|:|.....|...:|
Mouse   125 P-TLSVSGLGAPEHSVMP----AQIHPHHLGAMGHLHQA-----MGMSHPHAVAPHSAMPACLSD 179

  Fly   686 LE----ELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKL 743
            :|    |||.||:.|||||||||.||.|||.|:.  |:.| ...||:||.|||:|.||..||..|
Mouse   180 VESDPRELEAFAERFKQRRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIAL 244

  Fly   744 KPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESILG-RRRKKRTSIETTVRTTLEKAFLM 807
            ||:||.|||:|::...:.              :|.||...| .|::|||||....:.:||..|.:
Mouse   245 KPVLQAWLEEAEAAYREK--------------NSKPELFNGSERKRKRTSIAAPEKRSLEAYFAI 295

  Fly   808 NCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRINPS 847
            ..:|:||:|:.::|:|::.|.|:||||||:|||:||:..|
Mouse   296 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYS 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm2	NP_723763.1	PHA03247	<375..675	CDD:223021	39/183 (21%)
		POU	691..755	CDD:197673	39/66 (59%)
		Homeodomain	787..843	CDD:459649	25/55 (45%)
Pou4f3	NP_620395.2	POU-IV box	56..65		2/8 (25%)
		POU	179..256	CDD:197673	44/76 (58%)
		Homeodomain	275..331	CDD:459649	25/55 (45%)