Protein Alignment pdm2 and Pou1f1

DIOPT Version :9

• Sequence 1: NP_001285877.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: NP_032875.1
• Gene: Pou1f1 / 18736
• MGIID: 97588
• Length: 291
• Species: Mus musculus
• Alignment Length: 312
• Identity: 106/312 - (33%)
• Similarity: 159/312 - (50%)
• Gaps: 58/312 - (18%)

  Fly   540 ALQLQLHSYIEMVRQLAPEAFPNPNLATQFLLQNSLQALAQFQALQQMKQQQREDPLPSYSTPLA 604
            ||.|::|       ..|.|..|..|.||        ..::....|............||....:|
Mouse    22 ALPLRMH-------HSAAECLPASNHAT--------NVMSTATGLHYSVPSCHYGNQPSTYGVMA 71

  Fly   605 KSPLRSPSLSPVPRHSKSQQRTPPNSMTANSLGMSSAVMTPNTPSMQQQPQLQQSTPKPTSGLTV 669
            .|  .:|.|...|.|:.|....|          :...::..:..:.:.:.:|::.
Mouse    72 GS--LTPCLYKFPDHTLSHGFPP----------LHQPLLAEDPAASEFKQELRRK---------- 114

  Fly   670 ASAMAKLEQSP--EETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEA 732
                :||.:.|  .::.::.||||||..||.||||||:||.:||.|:..::|::||||||.|||.
Mouse   115 ----SKLVEEPIDMDSPEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRFEN 175

  Fly   733 LNLSFKNMCKLKPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTV 797
            |.|||||.||||.:|.||||:|:..     |.::|.....:.          |:||:||:|....
Mouse   176 LQLSFKNACKLKAILSKWLEEAEQV-----GALYNEKVGANE----------RKRKRRTTISVAA 225

  Fly   798 RTTLEKAFLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRINPSLD 849
            :..||:.|..:.||:|:||.:::|.||::|||:|||||||||:|||:..||:
Mouse   226 KDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVKTSLN 277

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm2	NP_001285877.1	POU	691..755	CDD:197673	41/63 (65%)
		Homeobox	789..842	CDD:278475	26/52 (50%)
Pou1f1	NP_032875.1	POU	124..198	CDD:197673	44/73 (60%)
		Homeobox	217..270	CDD:278475	26/52 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910