Sequence 1: | NP_001285877.1 | Gene: | pdm2 / 34673 | FlyBaseID: | FBgn0004394 | Length: | 893 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_599182.1 | Gene: | Pou4f2 / 171355 | RGDID: | 620075 | Length: | 412 | Species: | Rattus norvegicus |
Alignment Length: | 326 | Identity: | 102/326 - (31%) |
---|---|---|---|
Similarity: | 151/326 - (46%) | Gaps: | 71/326 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 571 LQNSL----QALAQFQALQQMKQQQREDP----------------LPSYSTPLAKS-PLRSPSLS 614
Fly 615 PVP----RHSKSQQRTPPNSMTANSL-----GMSSAVM------TPNTPSMQQQPQLQQSTPKPT 664
Fly 665 SGLTVASA---------MAKLEQSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLY 718
Fly 719 G-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESI 782
Fly 783 LG-RRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRINP 846
Fly 847 S 847 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pdm2 | NP_001285877.1 | POU | 691..755 | CDD:197673 | 39/66 (59%) |
Homeobox | 789..842 | CDD:278475 | 25/52 (48%) | ||
Pou4f2 | NP_599182.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 29..96 | ||
Required for transcriptional activation. /evidence=ECO:0000250|UniProtKB:Q63934 | 94..240 | 25/135 (19%) | |||
POU-IV box | 113..122 | 3/8 (38%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 123..191 | 11/67 (16%) | |||
Nuclear speckle targeting signal. /evidence=ECO:0000250|UniProtKB:Q12837 | 174..188 | 1/13 (8%) | |||
Required for DNA-binding and transcriptional repression. /evidence=ECO:0000250|UniProtKB:Q63934 | 241..412 | 76/189 (40%) | |||
POU | 253..330 | CDD:197673 | 42/82 (51%) | ||
Homeobox | 351..404 | CDD:278475 | 25/52 (48%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3802 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |