Protein Alignment pdm2 and Pou6f1

DIOPT Version :9

• Sequence 1: NP_001285877.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: XP_038934171.1
• Gene: Pou6f1 / 116545
• RGDID: 620615
• Length: 615
• Species: Rattus norvegicus
• Alignment Length: 624
• Identity: 155/624 - (24%)
• Similarity: 235/624 - (37%)
• Gaps: 177/624 - (28%)

  Fly   350 HETLRKPHV-----VPSELEHNHHWHGVVCD---------ANG-----------HATRLLHIAPP 389
            |||:|...|     :|:| |.:.....|..|         |.|           |:......:.|
  Rat    27 HETIRVLEVGVDAQLPAE-EESKGLESVAADGSQSGGPAEARGPAGEAGSCDPDHSAEATVKSLP 90

  Fly   390 RAGPTPLP-------THQQPPVGEVLPP----------NSTSFSTIVDPPKEPS-IYEQP--APN 434
            ...|:|.|       ...||...:.|.|          ...|.:|::.....|: ...||  .|.
  Rat    91 GIPPSPAPAIATLSQAPSQPQASQTLTPLAVQAAPQVLTQESLATVLTGVMVPAGAVTQPLLIPI 155

  Fly   435 GRHCRPANKVMRHMSNSPTP-----PSPLRSLSDCGKSFEEEELELGENCEMPQNLSSKRQAREL 494
            |...:.|.:....:...||.     |. |.:.|..|.:|:..             |:..:.|..|
  Rat   156 GITGQVAGQQGLAVWTIPTATVAALPG-LTAASPTGGAFKPP-------------LAGLQAAAVL 206

  Fly   495 DSELENEVLDLAPPPKRLAEEQEEEKVASVNPPQPVAFAPEEMHQALQLQLHSYIEMVRQLAPEA 559
            ::.|...| ..|||.:..:..|          |:|.| .|:.:.|..||         .|..|..
  Rat   207 NTALPTPV-QAAPPVQASSPAQ----------PRPPA-QPQTLFQTQQL---------LQTTPAI 250

  Fly   560 FPNPNLAT--------------------QFLLQNSLQALAQFQALQQMKQQQREDP--------L 596
            .|.|.:||                    .|.....:.:.|......|:.......|        :
  Rat   251 LPQPTVATVAAPTPKPVDAAPQITVQPAGFAFSPGIISAASLGGQTQILGSLTTAPVITNTIPSM 315

  Fly   597 PSYSTPLAKSP-----------LRSPSL-SPVPRHSKSQQRTPPN-----------SMTANSLGM 638
            |..|:|:..:.           :.|.|: :|.|..|...|...|.           ::.::.|..
  Rat   316 PGISSPILTNAQGQVIGALPWVVNSASVATPAPAQSLQVQAVTPQLLLNAQGQVIATLASSPLPQ 380

  Fly   639 SSAVMTPNTPSMQQQPQLQ-----QSTPKPTSGLT--------VASA-----------MAKLEQS 679
            ..||..|:||....:.::|     |:.|.|...||        .|||           :::|...
  Rat   381 PVAVRKPSTPESPAKSEVQPIQPTQAVPPPAVILTSPAPALKPSASAPIPITCSETPTVSQLVSK 445

  Fly   680 P------EETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFK 738
            |      |:..:|||:.:|||.||.||:.||.||..||.|:....|..:||:.|.|||.|:::.|
  Rat   446 PHTPSLDEDGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPK 510

  Fly   739 NMCKLKPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEK 803
            :..||||:|:|||.:|:   .::..|..|:........|       ::||:|||........|..
  Rat   511 SAQKLKPVLEKWLNEAE---LRNQEGQQNLMEFVGGEPS-------KKRKRRTSFTPQAIEALNA 565

  Fly   804 AFLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEK 842
            .|..|..||.:||:::::.||.|:||:|||||||||..|
  Rat   566 YFEKNPLPTGQEITEIAKELNYDREVVRVWFCNRRQTLK 604

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm2	NP_001285877.1	POU	691..755	CDD:197673	31/63 (49%)
		Homeobox	789..842	CDD:278475	24/52 (46%)
Pou6f1	XP_038934171.1	PHA03247	<45..430	CDD:223021	80/419 (19%)
		POU	453..527	CDD:197673	35/73 (48%)
		Homeobox	551..605	CDD:395001	25/54 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	144	1.000	Inparanoid score	I4350
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.860