Protein Alignment pdm2 and pou4f3

DIOPT Version :10

• Sequence 1: NP_723763.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: XP_002935313.1
• Gene: pou4f3 / 100498313
• XenbaseID: XB-GENE-853641
• Length: 337
• Species: Xenopus tropicalis
• Alignment Length: 366
• Identity: 125/366 - (34%)
• Similarity: 172/366 - (46%)
• Gaps: 75/366 - (20%)

  Fly   523 SVNPPQPVAFAPEEMHQALQ----LQLHSYIEMVRQLAPEAFPNPNLATQFL------LQNSLQA 577
            ::|..||..     ||..||    ..|||..|.:|::   ..|.|.|.....      |....:|
 Frog     3 AMNSKQPFG-----MHPILQEPKYPSLHSSSEAMRRV---CLPAPQLQGNIFGGFDENLLVRAEA 59

  Fly   578 LAQFQALQQMKQQQREDPLPSYST----PLAKS----PLRSPS-LSPVPRHSKSQ-------QRT 626
            ||....:...|....: |..||.|    |...|    ||..|| |:..|.||..|       ...
 Frog    60 LAAVDIVSHGKSHHYK-PDASYHTMSGIPCTSSSSAVPLSHPSALTAHPHHSVHQCLEGDLLDHI 123

  Fly   627 PPNSMTANSLGMSS-AVMTPNTPSMQQQP-------QLQQST----PKPTSGLTVASAMAKLEQS 679
            .| ::|.:.:|.|. .||     |.|..|       .|.|:.    |.|.|.....|.:..:|..
 Frog   124 SP-TLTVSGMGASDHTVM-----SSQLHPHHLGAMGHLHQAMGMGHPHPVSSHNGMSCINDVESD 182

  Fly   680 PEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMC 741
            |      .|||.||:.|||||||||.||.|||.|:.  |:.| ...||:||.|||:|.||..||.
 Frog   183 P------RELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMI 241

  Fly   742 KLKPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFL 806
            .|||:||.||::|::...:.       |......:|:      .|::|||||....:.:||..|.
 Frog   242 ALKPVLQAWLDEAEAAYREK-------NAKPELFNSS------ERKRKRTSIAAPEKRSLEAYFS 293

  Fly   807 MNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRINPS 847
            :..:|:||:|:.::|:|::.|.|:||||||:|||:||:..|
 Frog   294 IQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYS 334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm2	NP_723763.1	PHA03247	<375..675	CDD:223021	50/189 (26%)
		POU	691..755	CDD:197673	38/66 (58%)
		Homeodomain	787..843	CDD:459649	25/55 (45%)
pou4f3	XP_002935313.1	POU	178..255	CDD:197673	43/82 (52%)
		Homeodomain	274..330	CDD:459649	25/55 (45%)