Protein Alignment pdm2 and pou1f1

DIOPT Version :10

• Sequence 1: NP_723763.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: XP_031752450.1
• Gene: pou1f1 / 100492413
• XenbaseID: XB-GENE-854097
• Length: 373
• Species: Xenopus tropicalis
• Alignment Length: 238
• Identity: 95/238 - (39%)
• Similarity: 135/238 - (56%)
• Gaps: 44/238 - (18%)

  Fly   627 PPNSMTANSLGMSSAVMTP----------NTPSMQQQPQLQQSTPKPTSGLTVASAMAKLEQSPE 681
            ||..|:|:|..:... .||          .|...:|:.:.:.   ||..           |....
 Frog   156 PPCLMSASSCTIGHG-FTPVHQSLLGEDITTTDFKQEFRRKN---KPID-----------EPIDM 205

  Fly   682 ETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPL 746
            ::.::.|||:||..||.||||||:||.:||.|:..::|::||||||.|||.|.|||||.||||.:
 Frog   206 DSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSFKNACKLKSI 270

  Fly   747 LQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESILG--RRRKKRTSIETTVRTTLEKAFLMNC 809
            |.|||::|:..     |.::|            |.|.|  |:||:||:|....:..||..|....
 Frog   271 LSKWLDEAEQV-----GALYN------------EKIGGNERKRKRRTTISIAAKEALESHFGEQS 318

  Fly   810 KPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRINPSLDLDS 852
            ||:|:||.:::|.||::|||:|||||||||:|||:..||..:|
 Frog   319 KPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVKTSLHQNS 361

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm2	NP_723763.1	PHA03247	<375..675	CDD:223021	11/57 (19%)
		POU	691..755	CDD:197673	39/63 (62%)
		Homeodomain	787..843	CDD:459649	29/55 (53%)
pou1f1	XP_031752450.1	POU	205..279	CDD:197673	42/73 (58%)
		Homeodomain	296..352	CDD:459649	29/55 (53%)