Protein Alignment pdm2 and pou5f3.3

DIOPT Version :10

• Sequence 1: NP_723763.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: NP_001123836.1
• Gene: pou5f3.3 / 100170593
• XenbaseID: XB-GENE-5903504
• Length: 423
• Species: Xenopus tropicalis
• Alignment Length: 348
• Identity: 117/348 - (33%)
• Similarity: 172/348 - (49%)
• Gaps: 85/348 - (24%)

  Fly   581 FQALQQMKQQQREDPLP---------------SYSTPLAKSPLRSPSLSPVPRHSKSQQRTP-PN 629
            ||...|:......||.|               |..||...||:       ||.:::.....| ..
 Frog    78 FQFSNQVGALSSGDPSPEGRNEEDHGSISEERSSGTPSPNSPM-------VPSYAQYWHHAPWQG 135

  Fly   630 SMTANSLGMSSAVMTPNTPSMQQQPQLQQSTPKPTSGL----------TVASAMAKLEQ------ 678
            :.|..:||:.|..    .|...::|  |||...||:.|          .|:||::...:
 Frog   136 NPTGQALGLPSRA----HPDGGEKP--QQSDCSPTASLESGASNTEDEEVSSALSSRAERGLCSP 194

  Fly   679 SP----------EETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEAL 733
            ||          |:.|.|||:|:|||..||:|:.||:||||:|.|:|.|||..||||||.|||:|
 Frog   195 SPNNASFGSGNEEDGTTLEEMEEFAKELKQKRVALGYTQGDIGHALGILYGKMFSQTTICRFESL 259

  Fly   734 NLSFKNMCKLKPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVR 798
            .|:|||||||||||::||.:|:           |.:.:...:.........|:||.||..::.::
 Frog   260 QLTFKNMCKLKPLLEQWLGEAE-----------NNDNLQEMIHKAQLEEQNRKRKMRTCFDSVLK 313

  Fly   799 TTLEKAFLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEK---RINPSLDL---DSPTGTP 857
            ..||..|:.|.||.:.|::::::.|.::|:|:||||||||||||   |::.:.:.   .||..:|
 Frog   314 GRLEGHFMCNQKPGARELAEIAKELGLEKDVVRVWFCNRRQKEKSKSRMSKAHEFVGGASPVPSP 378

  Fly   858 LS--SHAFG-----------YPP 867
            ..  |..:|           |||
 Frog   379 AEHISQDYGLAPLHPNRPPFYPP 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm2	NP_723763.1	PHA03247	<375..675	CDD:223021	29/119 (24%)
		POU	691..755	CDD:197673	42/63 (67%)
		Homeodomain	787..843	CDD:459649	26/58 (45%)
pou5f3.3	NP_001123836.1	PTZ00395	<7..>177	CDD:185594	26/111 (23%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	85..211		29/138 (21%)
		Pou	210..281	CDD:459692	47/70 (67%)
		Homeodomain	302..357	CDD:459649	24/54 (44%)