Protein Alignment pdm2 and pou6f1

DIOPT Version :10

• Sequence 1: NP_723763.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: XP_012811781.1
• Gene: pou6f1 / 100126212
• XenbaseID: XB-GENE-854918
• Length: 604
• Species: Xenopus tropicalis
• Alignment Length: 512
• Identity: 130/512 - (25%)
• Similarity: 198/512 - (38%)
• Gaps: 139/512 - (27%)

  Fly   384 LHIAPPRAGPTPLP-----------THQQPPVGEVLPPNSTSFSTIVDPPKEPSIYEQPAPNGRH 437
            |..|||..|...||           |..|.|: :......|.:.|      :|::..||:
 Frog   168 LTTAPPAGGVFKLPLANLQAASLLNTALQAPM-QAAQAIQTVYQT------QPALQAQPS----- 220

  Fly   438 CRPANKVMRHMSNSPTPPSPLRSLSDCGKSFEEEELELGENCEMPQNLSSKRQARELDSELENEV 502
                      :..:..|.:.|::.|..          .|:...:|..|
 Frog   221 ----------LQTAVQPMTTLQAASPL----------QGQTAVLPGTL----------------- 248

  Fly   503 LDLAPPPKRLAEEQEEEKVASVNPPQPVAFA--PEEMHQALQLQLHSYIEMVRQLA-----PEAF 560
                   ::.||.|.:..|      ||.:|.  |..:..|   .|....:::..||     ..|.
 Frog   249 -------QKAAEPQSQITV------QPASFTFNPAIISAA---SLGGQAQLLGSLAATPIIANAI 297

  Fly   561 PNPNLATQFLLQN---------------------------SLQALAQFQALQQMKQQQREDPLPS 598
            |.....|..::.|                           |.|.|.|....|.:...|.:.....
 Frog   298 PGVQGITSQIITNTQGQVIGTLPWLLNSPGITAGAATAAVSAQNLVQTVTPQLLLNAQGQVIATL 362

  Fly   599 YSTPLAKSPLRSPSLSPVPRHSKSQQR--------TPPNSMTANSLGMSSAVMTPNTPSMQQQPQ 655
            .|:|:.:..:|..:....|.|.||:|:        |.|:.:.||.        .|.|.|...|..
 Frog   363 ASSPIQQGAVRKQTPQDSPAHPKSEQQVIQPTPAITQPSVVVANP--------APPTTSTSTQVH 419

  Fly   656 LQQSTPKPTSGLTVASAMAKLEQSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGN 720
            :..|.| ||.|..|:.|.:  ....::..:|||:.:|||.||.||:.||.||..||.|:....|.
 Frog   420 ISCSEP-PTVGQLVSKAHS--GNYDDDGINLEEIREFAKEFKIRRLSLGLTQTQVGQALTATEGP 481

  Fly   721 DFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESILGR 785
            .:||:.|.|||.|:::.|:..||||:|:|||.:|:   .::..|..|:........|       :
 Frog   482 AYSQSAICRFEKLDITPKSAQKLKPVLEKWLNEAE---MRNQEGQQNLMEFVGGEPS-------K 536

  Fly   786 RRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEK 842
            :||:|||........|...|..|..|..:||:.:::.||.|:||:|||||||||..|
 Frog   537 KRKRRTSFTPQAVEVLNAYFEKNSLPAGQEITDIAKELNYDREVVRVWFCNRRQTLK 593

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm2	NP_723763.1	PHA03247	<375..675	CDD:223021	66/343 (19%)
		POU	691..755	CDD:197673	31/63 (49%)
		Homeodomain	787..843	CDD:459649	26/56 (46%)
pou6f1	XP_012811781.1	POU	442..516	CDD:197673	34/73 (47%)
		Homeodomain	538..594	CDD:459649	26/56 (46%)