DRSC/TRiP Functional Genomics Resources

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Protein Alignment nub and POU2F2

DIOPT Version :9

Sequence 1:NP_001097153.1 Gene:nub / 34669 FlyBaseID:FBgn0085424 Length:961 Species:Drosophila melanogaster
Sequence 2:XP_016882373.1 Gene:POU2F2 / 5452 HGNCID:9213 Length:723 Species:Homo sapiens


Alignment Length:586 Identity:216/586 - (36%)
Similarity:273/586 - (46%) Gaps:141/586 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   426 NSSVGTSSDRCRSPLSPALSLSHQQAKRQLMSLQPHPAHHHHNPHHLNHLNHHQYKQEEDYDDAN 490
            :||:|....|...||         :|::|.:.   .|:.|.....:....||             
Human     3 HSSMGAPEIRMSKPL---------EAEKQGLD---SPSEHTDTERNGPDTNH------------- 42

  Fly   491 GGALNLTSDNSRHSTQSPSNSVKSATASPVPVISVPSPVPPMIS----------PVLAPSGCGST 545
                           |:|.|.....:.||    :.||....::|          |.|:|....:.
Human    43 ---------------QNPQNKTSPFSVSP----TGPSTKVGILSGLHLTFWGPGPCLSPPQIKAE 88

  Fly   546 TPNSMAAAAAAAAAVASTMGSGISPLLALPGMSSPQAQLAAAGLGMNNPLLTGS-------LSPQ 603
            .|:..:|.||.           :.|..|.|.:  |||||          :||||       |.| 
Human    89 DPSGDSAPAAP-----------LPPQPAQPHL--PQAQL----------MLTGSQLAGLTALMP- 129

  Fly   604 DFAQFHQLLQQRQVALTQQFNSYMELLRSGSLGLAQDDPALTAQVAAAQFLMQSQLQALSQASQQ 668
              ||...||||.|..|      ....::..|...|.:..|..|..:|:.....|...:.|.::.|
Human   130 --AQQQLLLQQAQAQL------LAAAVQQSSAAAAANAAAAAAAASASSSTSSSSSSSASSSTSQ 186

  Fly   669 LQALQKQQQRQVDEPLQLNHKMTQQPRSSTPHSIRSPIAIRSPASSPQQL----------HHHHH 723
            ..|..........:|       ..||..:...::..||.:  .|...|||          .||..
Human   187 PPASSGGGDLPPPQP-------ASQPPGTPQLTLSQPIQL--TAQDIQQLLQLQQLVLVPGHHLQ 242

  Fly   724 HPLQITPPSSAAS--------------LKLSGMLTPSTPTSG--TQMSQGTTTPQPKTVASAAAA 772
            .|.|...|.:..|              .:..|.|..|.|.:|  ||.....|.|.|. ::.....
Human   243 PPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDPH-LSHPQPP 306

  Fly   773 RAAGEPS-PEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLS 836
            :....|| |||.:|||||||||:||||||||||||||||||||||||||||||||||||||||||
Human   307 KCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLS 371

  Fly   837 FKNMCKLKPLLQKWLDDADRTIQATGGVFDPAALQATVSTPE-----IIGRRRKKRTSIETTIRG 896
            |||||||||||:|||:||: |:.....:..|..|    |:|.     :.||||||||||||.:|.
Human   372 FKNMCKLKPLLEKWLNDAE-TMSVDSSLPSPNQL----SSPSLGFDGLPGRRRKKRTSIETNVRF 431

  Fly   897 ALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRINPSLDSP-TGADDDESSYMM 960
            ||||:||||||||||||..:|::|.|||||:||||||||||||||||...:| ..:....:||..
Human   432 ALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSP 496

  Fly   961 H 961
            |
Human   497 H 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nubNP_001097153.1 DUF4472 315..>399 CDD:291409
POU 791..855 CDD:197673 60/63 (95%)
Homeobox 886..939 CDD:278475 41/52 (79%)
POU2F2XP_016882373.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 142 1.000 Domainoid score I4687
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 277 1.000 Inparanoid score I2945
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003004
OrthoInspector 1 1.000 - - mtm8655
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11636
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9475
SonicParanoid 1 1.000 - - X2466
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
98.990

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