Protein Alignment nub and pou1f1

DIOPT Version :10

• Sequence 1: NP_001097153.1
• Gene: nub / 34669
• FlyBaseID: FBgn0085424
• Length: 961
• Species: Drosophila melanogaster
• Sequence 2: NP_998016.1
• Gene: pou1f1 / 405777
• ZFINID: ZDB-GENE-040630-7
• Length: 350
• Species: Danio rerio
• Alignment Length: 347
• Identity: 118/347 - (34%)
• Similarity: 170/347 - (48%)
• Gaps: 96/347 - (27%)

  Fly   683 PLQLNHKMTQQPRSSTPHSIRSPIAIRSPASSPQQLHHHH-------------HHPL-------- 726
            ||.::|.......::   :|.|.:....|.....:..|.|             |:|:
Zfish    24 PLLMHHSAAADCHNT---NICSTVPSGLPLVQSSKRSHMHLSTSALGNASASLHYPMPPCHYSNQ 85

  Fly   727 QITPPSSAASLKLSGML-------TPSTP----TSGTQMSQGTTTPQ----PK-TVASAAAARAA 775
            |.|....||...||..:       |.|.|    .:|....||...|:    |: ::|..:.|.:.
Zfish    86 QTTYGMMAAQEMLSASISQTRILQTCSVPHANMVNGANSLQGALAPRLYKFPEHSLAGGSCALSH 150

  Fly   776 G-EPSP------------------------EETTDLE-----ELEQFAKTFKQRRIKLGFTQGDV 810
            | .|.|                        :||.|::     |||:||..||.||||||:||.:|
Zfish   151 GFAPLPQTLLTDEPILGDIKQELRRKSRTLDETPDMDSPQIRELEKFANDFKLRRIKLGYTQTNV 215

  Fly   811 GLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQATGGVFDPAALQATVS 875
            |.|:..::|::||||||.|||.|.|||||.||||.:|.|||::|::    .|.:|:
Zfish   216 GEALAAVHGSEFSQTTICRFENLQLSFKNACKLKSILAKWLEEAEQ----AGALFN--------- 267

  Fly   876 TPEIIG---RRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQK 937
              |.:|   |:||:||:|....:.|||::|:...||:|:||.::|:.|.:||||||||||||||:
Zfish   268 --EKMGLHERKRKRRTTISLGAKEALERSFVEKSKPSSQEIVRMAEGLHLEKEVVRVWFCNRRQR 330

  Fly   938 EKRINPSLDSPTGADDDESSYM 959
            |||:..||        ..||:|
Zfish   331 EKRVKTSL--------HHSSFM 344

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nub	NP_001097153.1	POU	791..855	CDD:197673	39/63 (62%)
		Homeodomain	884..940	CDD:459649	31/55 (56%)
pou1f1	NP_998016.1	POU	186..260	CDD:197673	42/73 (58%)
		Homeodomain	277..333	CDD:459649	31/55 (56%)