Protein Alignment nub and Pou3f4

DIOPT Version :9

• Sequence 1: NP_001097153.1
• Gene: nub / 34669
• FlyBaseID: FBgn0085424
• Length: 961
• Species: Drosophila melanogaster
• Sequence 2: NP_058948.1
• Gene: Pou3f4 / 29589
• RGDID: 61947
• Length: 361
• Species: Rattus norvegicus
• Alignment Length: 368
• Identity: 146/368 - (39%)
• Similarity: 180/368 - (48%)
• Gaps: 85/368 - (23%)

  Fly   625 SYMELLRSGSLGLAQDDPALTAQVAAAQFLMQSQLQALSQASQQL-------------------- 669
            |...|:.:.|.|:.|..|....|    :.|....||.:......|
  Rat    13 SSSSLVHADSAGMQQGSPFRNPQ----KLLQSDYLQGVPSNGHPLGHHWVTSLSDGGPWSSTLAT 73

  Fly   670 QALQKQQQRQVDEPLQL----NHKMTQQPRSSTPHSIRSPIAIRSPASSPQQLHH--HHHHP-LQ 727
            ..|.:|..:...|.|||    :|:                        ||...||  |.:|| ..
  Rat    74 SPLDQQDVKPGREDLQLGAIIHHR------------------------SPHVAHHSPHTNHPNAW 114

  Fly   728 ITPPSSAASLKLSGM-----LTPSTPTSGTQMSQGTTTPQPKTVASAAAARAAGEP--------- 778
            ...|:..:|:..||.     ..|....|| .:..|..||.|...::.:......||
  Rat   115 GASPAPNSSITSSGQPLNVYSQPGFTVSG-MLEHGGLTPPPAAASTQSLHPVLREPPDHGELGSH 178

  Fly   779 -----SPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFK 838
                 |.|||...:|||||||.||||||||||||.|||||:|.||||.||||||.|||||.||||
  Rat   179 HCQDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 243

  Fly   839 NMCKLKPLLQKWLDDADRTIQATGGVFDPAALQATVSTPEIIGRRRKKRTSIETTIRGALEKAFL 903
            |||||||||.|||::||   .:||   .|.::....:.    ||:||||||||.:::|.||..||
  Rat   244 NMCKLKPLLNKWLEEAD---SSTG---SPTSIDKIAAQ----GRKRKKRTSIEVSVKGVLETHFL 298

  Fly   904 ANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRINPSLD 946
            ...||.::||:.|||.|.:||||||||||||||||||:.|..|
  Rat   299 KCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGD 341

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nub	NP_001097153.1	DUF4472	315..>399	CDD:291409
		POU	791..855	CDD:197673	53/63 (84%)
		Homeobox	886..939	CDD:278475	34/52 (65%)
Pou3f4	NP_058948.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	99..131		10/31 (32%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	144..192		10/47 (21%)
		POU	186..260	CDD:197673	59/73 (81%)
		Homeobox	281..335	CDD:395001	35/53 (66%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	334..361		4/8 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810