Sequence 1: | NP_001097153.1 | Gene: | nub / 34669 | FlyBaseID: | FBgn0085424 | Length: | 961 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006248036.1 | Gene: | Pou1f1 / 25517 | RGDID: | 3367 | Length: | 317 | Species: | Rattus norvegicus |
Alignment Length: | 302 | Identity: | 112/302 - (37%) |
---|---|---|---|
Similarity: | 164/302 - (54%) | Gaps: | 60/302 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 683 PLQLNHKMTQ-QPRSSTPHSIRSPI-AIRSPASSPQQLHHHHHHPLQITPPSSAASLKLSGMLTP 745
Fly 746 STPTSGTQMS-----QGTTTP------------------QPKTVASAAA----------ARAAGE 777
Fly 778 PSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCK 842
Fly 843 LKPLLQKWLDDADRTIQATGGVFDPAALQATVSTPEIIG---RRRKKRTSIETTIRGALEKAFLA 904
Fly 905 NQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRINPSLD 946 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nub | NP_001097153.1 | DUF4472 | 315..>399 | CDD:291409 | |
POU | 791..855 | CDD:197673 | 40/63 (63%) | ||
Homeobox | 886..939 | CDD:278475 | 28/52 (54%) | ||
Pou1f1 | XP_006248036.1 | POU | 150..224 | CDD:197673 | 43/73 (59%) |
Homeobox | 243..297 | CDD:395001 | 29/53 (55%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3802 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |