Protein Alignment nub and Pou6f1

DIOPT Version :9

• Sequence 1: NP_001097153.1
• Gene: nub / 34669
• FlyBaseID: FBgn0085424
• Length: 961
• Species: Drosophila melanogaster
• Sequence 2: XP_006520671.1
• Gene: Pou6f1 / 19009
• MGIID: 102935
• Length: 610
• Species: Mus musculus
• Alignment Length: 675
• Identity: 168/675 - (24%)
• Similarity: 256/675 - (37%)
• Gaps: 185/675 - (27%)

  Fly   367 DKVLELTGAAVALYGHLNNASKDVRDLEQCLKLQDPND---------ISRLSRSPSPLQSN---- 418
            |..|.:....:.:.||     :.:|.||..:..|.|.:         .:..|:|..|::::
Mouse     8 DSSLTVNEQVIVMSGH-----ETIRVLEVGVDAQLPAEEESKGLESVAAGGSQSGGPVEASGPAE 67

  Fly   419 ASDCDDNNSSVGTSSDRCRSPLSPALSLSHQQAKRQLMSLQPHPAHHHHNPHHLNHLNHHQYKQE 483
            |..||.::|:..|.......|.|||                  ||....|
Mouse    68 AGSCDPDHSAEATVKSLPGVPPSPA------------------PAIATFN--------------- 99

  Fly   484 EDYDDANGGALNLTSDNSRHSTQSPSNSVKSATASPVPVISVPS----------------PVPPM 532
                                  |:||....|.|.:|:.|.:.|.                |...:
Mouse   100 ----------------------QAPSQPQASQTLTPLAVQAAPQVLTQESLATVLTGVMVPAGTV 142

  Fly   533 ISPVLAPSGCGS-----------TTPNSMAAAAAAAAAVASTMGSGISPLLAL------------ 574
            ..|:|.|.|...           |.|.:..||.....|.:.|.|:...||..|
Mouse   143 TQPLLIPIGITGQVAGQQGLAVWTIPTATVAALPGLTAASPTGGTFKPPLAGLQAAAVLNTALPT 207

  Fly   575 PGMSSPQAQLAAAG----------LGMNNPLL--TGSLSPQDFAQFHQLLQQRQVALTQQ----- 622
            |..::|..|.::..          |....|||  |.::.||..|........:.|..|.|
Mouse   208 PVQAAPPIQASSPAQPRPPAQPQPLFQTQPLLQTTPAILPQPTAATVAAPTPKTVDATPQITVQP 272

  Fly   623 --FNSYMELLRSGSLGLAQDD--------PALTAQV-----AAAQFLMQSQLQAL-------SQA 665
              |.....::.:.||| .|..        |.:|..:     .::|.|..:|.|.:       :.|
Mouse   273 AGFAFSPGIISAASLG-GQTQILGSLTTAPVITNTIPSMPGISSQILTNAQGQVIGALPWVVNSA 336

  Fly   666 SQQLQALQKQQQRQVDEPLQLNHKMTQQPRSSTPHSIRSPIAIRSPASSPQQLHHHHHHPLQITP 730
            |....|..:..|.|...|..|.:...|...:.....:..|:|:|.| ::|:........|:|.|.
Mouse   337 SVATPAPAQSLQVQAVTPQLLLNAQGQVIATLASSPLPQPVAVRKP-NTPESPAKSEVQPIQPTQ 400

  Fly   731 --PSSAASLKLSGMLTPSTPTSGTQMSQGTTTPQPKTVA-SAAAARAAGEP-SP---EETTDLEE 788
              |..|.      :||..||.    :.....||.|.|.: :...::...:| :|   |:..:|||
Mouse   401 AVPQPAV------ILTSPTPA----LKPSAATPIPITCSETPTVSQLVSKPHTPSLDEDGINLEE 455

  Fly   789 LEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDD 853
            :.:|||.||.||:.||.||..||.|:....|..:||:.|.|||.|:::.|:..||||:|:|||.:
Mouse   456 IREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLME 520

  Fly   854 ADRTIQATGGVFDPAALQATVSTPEIIG----RRRKKRTSIETTIRGALEKAFLANQKPTSEEIT 914
            |:...|           :...:..|.:|    ::||:|||.......||...|..|..||.:|||
Mouse   521 AELRNQ-----------EGQQNLMEFVGGEPSKKRKRRTSFTPQAIEALNAYFEKNPLPTGQEIT 574

  Fly   915 QLADRLSMEKEVVRVWFCNRRQKEK 939
            ::|..|:.::||||||||||||..|
Mouse   575 EIAKELNYDREVVRVWFCNRRQTLK 599

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nub	NP_001097153.1	DUF4472	315..>399	CDD:291409	7/31 (23%)
		POU	791..855	CDD:197673	31/63 (49%)
		Homeobox	886..939	CDD:278475	26/52 (50%)
Pou6f1	XP_006520671.1	PHA03247	<48..425	CDD:223021	87/443 (20%)
		Pou	448..522	CDD:389985	35/73 (48%)
		Homeobox	546..600	CDD:365835	27/54 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810