Sequence 1: | NP_001097153.1 | Gene: | nub / 34669 | FlyBaseID: | FBgn0085424 | Length: | 961 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006539710.1 | Gene: | Pou2f2 / 18987 | MGIID: | 101897 | Length: | 717 | Species: | Mus musculus |
Alignment Length: | 583 | Identity: | 218/583 - (37%) |
---|---|---|---|
Similarity: | 271/583 - (46%) | Gaps: | 149/583 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 430 GTSSDRCRSPLSPALSLSHQQAKRQLMSLQPHPAHHHHNPHHLNHLNHHQYKQEEDYDDANGGAL 494
Fly 495 NLTSDNSRHSTQSPSNSVKSATASPVPVISVPSPVPPMIS----------PVLAPSGCGSTTPNS 549
Fly 550 MAAAAAAAAAVASTMGSGISPLLALPGMSSPQAQLAAAGLGMNNPLLTGS----LSPQDFAQFHQ 610
Fly 611 LLQQRQ----VALTQQFNSYMELLRSGSLGLAQDDPALTAQVAAAQFLMQSQLQALSQASQQLQA 671
Fly 672 LQKQQQRQVDEPLQLNHKMTQQPRSSTPHSIRSPIAIRSPASSPQQL----------HHHHHHPL 726
Fly 727 QITPPSSAAS--------------LKLSGMLTPSTPTSG--TQMSQGTTTPQPKTVASAAAARAA 775
Fly 776 GEPS-PEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKN 839
Fly 840 MCKLKPLLQKWLDDADRTIQATGGVFDPAALQATVSTPE-----IIGRRRKKRTSIETTIRGALE 899
Fly 900 KAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRINPSLDSP-TGADDDESSYMMH 961 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nub | NP_001097153.1 | DUF4472 | 315..>399 | CDD:291409 | |
POU | 791..855 | CDD:197673 | 60/63 (95%) | ||
Homeobox | 886..939 | CDD:278475 | 41/52 (79%) | ||
Pou2f2 | XP_006539710.1 | PRK10263 | <206..>334 | CDD:236669 | 42/130 (32%) |
POU | 313..387 | CDD:197673 | 68/73 (93%) | ||
Homeobox | 418..472 | CDD:365835 | 42/53 (79%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 142 | 1.000 | Domainoid score | I4663 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3802 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 276 | 1.000 | Inparanoid score | I2927 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003004 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8890 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11636 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2466 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.960 |