Protein Alignment nub and unc-86

DIOPT Version :10

• Sequence 1: NP_001097153.1
• Gene: nub / 34669
• FlyBaseID: FBgn0085424
• Length: 961
• Species: Drosophila melanogaster
• Sequence 2: NP_001021191.2
• Gene: unc-86 / 176157
• WormBaseID: WBGene00006818
• Length: 357
• Species: Caenorhabditis elegans
• Alignment Length: 354
• Identity: 107/354 - (30%)
• Similarity: 146/354 - (41%)
• Gaps: 94/354 - (26%)

  Fly   621 QQFNSYMELLRSGSLGLAQDDPALTAQVAAAQFLMQSQLQALSQASQQLQALQKQQQRQVDEPLQ 685
            |.||:        ||..:.|||.|.|:.|..                .|..:..:...|:..||.
 Worm    17 QPFNN--------SLFGSFDDPILNARAAQV----------------ALADIDVKNVPQLTNPLM 57

  Fly   686 LNHKMTQQ--------------------PRSSTPHSIRSPIAIRSPASSPQQLHHHHHHPLQITP 730
            ..|.|...                    |.||.|..    .::..|.||..|
 Worm    58 RPHDMFSYSNYFSGIHDTSAATNIYQGLPSSSEPFD----ASVVVPTSSDDQ------------- 105

  Fly   731 PSSAASLKLSGMLTPSTPTSGTQMSQGTTTP------QPKTVASAAAAR-----AAGEPSPEETT 784
                        :||.......|.|.|...|      .|.:..|.|::.     ....|:.:..|
 Worm   106 ------------MTPLQQVMAMQQSYGAPPPFQYNMTHPFSTTSIASSNNLARYPIAPPTSDMDT 158

  Fly   785 DLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPL 846
            |..:||.||:.|||||||||.||.|||.|:.  |:.| ...||:||.|||:|.||..||..|||:
 Worm   159 DPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPI 223

  Fly   847 LQKWLDDADRTIQATGGVFDPAALQATVSTPEIIGRRRKKRTSIETTIRGALEKAFLANQKPTSE 911
            |..||:.|:..::....:.|...:.....       :::|||||....:..||:.|....:|:.|
 Worm   224 LHSWLEKAEEAMKQKDTIGDINGILPNTD-------KKRKRTSIAAPEKRELEQFFKQQPRPSGE 281

  Fly   912 EITQLADRLSMEKEVVRVWFCNRRQKEKR 940
            .|..:||||.::|.||||||||:|||:||
 Worm   282 RIASIADRLDLKKNVVRVWFCNQRQKQKR 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nub	NP_001097153.1	POU	791..855	CDD:197673	37/66 (56%)
		Homeodomain	884..940	CDD:459649	27/55 (49%)
unc-86	NP_001021191.2	POU	155..232	CDD:197673	41/76 (54%)
		Homeodomain	254..310	CDD:459649	27/55 (49%)