Protein Alignment nub and Pou6f1

DIOPT Version :9

• Sequence 1: NP_001097153.1
• Gene: nub / 34669
• FlyBaseID: FBgn0085424
• Length: 961
• Species: Drosophila melanogaster
• Sequence 2: XP_038934171.1
• Gene: Pou6f1 / 116545
• RGDID: 620615
• Length: 615
• Species: Rattus norvegicus
• Alignment Length: 581
• Identity: 154/581 - (26%)
• Similarity: 220/581 - (37%)
• Gaps: 170/581 - (29%)

  Fly   488 DANGGALNLTSDNSRHSTQSPSNSVKSATASPVPVISVPSPVP--PMISPVLAPSGCGST----T 546
            :|.|.|....|.:..||.::...|:.....||.|.|:..|..|  |..|..|.|....:.    |
  Rat    65 EARGPAGEAGSCDPDHSAEATVKSLPGIPPSPAPAIATLSQAPSQPQASQTLTPLAVQAAPQVLT 129

  Fly   547 PNSMAAAAAAAAAVASTMGSGISPLL--------------------------ALPGMSS------ 579
            ..|:|.........|   |:...|||                          ||||:::
  Rat   130 QESLATVLTGVMVPA---GAVTQPLLIPIGITGQVAGQQGLAVWTIPTATVAALPGLTAASPTGG 191

  Fly   580 ----PQAQLAAAGLGMNNPLLT-----------------GSLSPQDFAQFHQLLQQRQVALTQ-- 621
                |.|.|.||.: :|..|.|                 ....||...|..||||.....|.|
  Rat   192 AFKPPLAGLQAAAV-LNTALPTPVQAAPPVQASSPAQPRPPAQPQTLFQTQQLLQTTPAILPQPT 255

  Fly   622 -----------------------------------QFNSYMELLRSGSLGLAQ------------ 639
                                               ......::|  |||..|.
  Rat   256 VATVAAPTPKPVDAAPQITVQPAGFAFSPGIISAASLGGQTQIL--GSLTTAPVITNTIPSMPGI 318

  Fly   640 DDPALT-AQ---VAAAQFLMQSQLQALSQASQQLQALQKQQQRQVDEPLQLNHKMTQQPRSSTPH 700
            ..|.|| ||   :.|..:::.|...|....:|.||......|..::...|:...:...|
  Rat   319 SSPILTNAQGQVIGALPWVVNSASVATPAPAQSLQVQAVTPQLLLNAQGQVIATLASSP------ 377

  Fly   701 SIRSPIAIRSPAS--SPQQLHHHHHHPLQITPP------SSAASLKLSG-----MLTPSTPTSGT 752
             :..|:|:|.|::  ||.:.......|.|..||      |.|.:||.|.     :....|||
  Rat   378 -LPQPVAVRKPSTPESPAKSEVQPIQPTQAVPPPAVILTSPAPALKPSASAPIPITCSETPT--- 438

  Fly   753 QMSQGTTTPQPKTVASAAAARAAGEPSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKL 817
             :||..:.|...::             .|:..:|||:.:|||.||.||:.||.||..||.|:...
  Rat   439 -VSQLVSKPHTPSL-------------DEDGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTAT 489

  Fly   818 YGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQATGGVFDPAALQATVSTPEIIG- 881
            .|..:||:.|.|||.|:::.|:..||||:|:|||::|:...|           :...:..|.:|
  Rat   490 EGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLNEAELRNQ-----------EGQQNLMEFVGG 543

  Fly   882 ---RRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEK 939
               ::||:|||.......||...|..|..||.:|||::|..|:.::||||||||||||..|
  Rat   544 EPSKKRKRRTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRVWFCNRRQTLK 604

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nub	NP_001097153.1	DUF4472	315..>399	CDD:291409
		POU	791..855	CDD:197673	31/63 (49%)
		Homeobox	886..939	CDD:278475	26/52 (50%)
Pou6f1	XP_038934171.1	PHA03247	<45..430	CDD:223021	80/377 (21%)
		POU	453..527	CDD:197673	35/73 (48%)
		Homeobox	551..605	CDD:395001	27/54 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810