DRSC/TRiP Functional Genomics Resources

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Protein Alignment nub and POU6F2

DIOPT Version :10

Sequence 1:NP_001097153.1 Gene:nub / 34669 FlyBaseID:FBgn0085424 Length:961 Species:Drosophila melanogaster
Sequence 2:NP_001357888.1 Gene:POU6F2 / 11281 HGNCID:21694 Length:720 Species:Homo sapiens


Alignment Length:975 Identity:205/975 - (21%)
Similarity:329/975 - (33%) Gaps:376/975 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 HHQQQHQLLLQQQLLQQHVANSSPLQHLSNLFGQHLPTHSLQHLIAAEYWQQQQQQPAATIKSEP 121
            |.:..|....:|.::..:::.......:..:.||       ..:||.     |..:|..:::||.
Human     2 HARNPHSPFQRQHMMDCYLSAQQDTGTMQAVIGQ-------DPMIAG-----QVSKPLLSVRSEM 54

  Fly   122 TT----QSVAATSVFSF---------------TPQQHVNFAASLVALQQNDAL-----PEETMAT 162
            ..    :..||||....               ||       :.|...:.|.||     |::..|:
Human    55 NAELRGEDKAATSDSELNEPLLAPVESNDSEDTP-------SKLFGARGNPALSDPGTPDQHQAS 112

  Fly   163 ATATPTPATTASGAATAAAVATSPAAATTLKAPTATQAAATMDDIDDDDDDSNNGGHMQNAGVGN 227
            .|..|.|            |...|..       ||.|.|:.:                  |||  
Human   113 QTHPPFP------------VGPQPLL-------TAQQLASAV------------------AGV-- 138

  Fly   228 FKFEPGQQLGTPA-NEAVLTSSEENKDG--------TLTAVDTNMRDVSANHSSSFLSSSPASST 283
               .||   |.|| |:.:|...  |..|        .||....|:.::..      |.::.|:..
Human   139 ---MPG---GPPALNQPILIPF--NMAGQLGGQQGLVLTLPTANLTNIQG------LVAAAAAGG 189

  Fly   284 LVSCHSPSPPLPLLADQDDGTRRMRDKKLTLELKLQSCDEYVEQPKDKGAERLQPAQIANDNAPS 348
            :::       |||                                     :.||.....|... .
Human   190 IMT-------LPL-------------------------------------QNLQATSSLNSQL-Q 209

  Fly   349 PLHLKLEEQDEQEQADVKDKVLELTGAAVALYGHLNNASKDVRDLEQCLKLQDPNDISRLSRSPS 413
            .|.|:|::|.:|:|                                     |.|...:.....|:
Human   210 QLQLQLQQQQQQQQ-------------------------------------QQPPPSTNQHPQPA 237

  Fly   414 PLQSNASDCDDNNSSVGTSSDRCRSPLSPALSL----SHQQAKRQLMSLQPHPAHHHHNPHHLNH 474
            |...:.|.               :.||.|....    :.||.......||..|....|.||    
Human   238 PQAPSQSQ---------------QQPLQPTPPQQPPPASQQPPAPTSQLQQAPQPQQHQPH---- 283

  Fly   475 LNHHQYKQEEDYDDANGGALNLTSDNSRHSTQSPSNSVKSATASPVPVISVPSPVPPMISPVLAP 539
             :|.|.:.:..           .:..|....|.||.|......||   ::.|:|:..:.:|:.:.
Human   284 -SHSQNQNQPS-----------PTQQSSSPPQKPSQSPGHGLPSP---LTPPNPLQLVNNPLASQ 333

  Fly   540 SGCGSTTPNSMAAAAAAAAAVASTMG-------------SGISPLLALPGMSSPQAQLAAAGLGM 591
            :...:...:|:|::.|...|::|..|             .|..||:..||.|| ||.....||.:
Human   334 AAAAAAAMSSIASSQAFGNALSSLQGVTGQLVTNAQGQIIGTIPLMPNPGPSS-QAASGTQGLQV 397

  Fly   592 NNPLLTGSLSPQDFAQFHQLL--QQRQVALTQQFNSYMELLRSGSLGLAQDDPALTAQVAAAQFL 654
            .      .::|       |||  .|.|:..|...|..:.::.:..:.|:...|        .|.|
Human   398 Q------PITP-------QLLTNAQGQIIATVIGNQILPVINTQGITLSPIKP--------GQQL 441

  Fly   655 MQSQLQALSQASQQLQALQKQQQRQVDEPLQLNHKMTQQPRSSTPHSIRSPIAIRSPASSPQQLH 719
            .|....::.||:.|            ...|.|.|  :|...|.:|        :|..:||     
Human   442 HQPSQTSVGQAASQ------------GNLLHLAH--SQASMSQSP--------VRQASSS----- 479

  Fly   720 HHHHHPLQITPPSSAASLKLSGMLTPSTPTSGTQMSQGTTTPQPKTVASAAAARAAGEPSPEETT 784
                        ||::|             |.:.:|.|.....|:|        ||||   .:..
Human   480 ------------SSSSS-------------SSSALSVGQLVSNPQT--------AAGE---VDGV 508

  Fly   785 DLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTI---------------------- 827
            :|||:.:|||.||.||:.||.||..||.|:....|..:||:.|                      
Human   509 NLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILRSHFFLPQEAQENTIA 573

  Fly   828 --------------SRFEALNLSFKNMCKLKPLLQKWLDDADRTIQATGGVFDPAALQATVSTPE 878
                          :|||.|:::.|:..|:||:|::|:.:|:...:        |.:|   :..|
Human   574 SSLTAKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAEARHR--------AGMQ---NLTE 627

  Fly   879 IIG----RRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEK 939
            .||    ::||:|||........|...|..|..|:.:|:|::|::|:.::|||||||||:||..|
Human   628 FIGSEPSKKRKRRTSFTPQALEILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALK 692

  Fly   940  939
            Human   693  692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nubNP_001097153.1 POU 791..855 CDD:197673 28/99 (28%)
Homeodomain 884..940 CDD:459649 25/56 (45%)
POU6F2NP_001357888.1 Pou 506..615 CDD:473999 31/108 (29%)
Homeodomain 637..693 CDD:459649 25/56 (45%)

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